Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
ATN1P54259 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.58■■□□□ 1.21
ATN1P54259 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
ATN1P54259 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.58■■□□□ 1.21
ATN1P54259 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC22.58■■□□□ 1.21
ATN1P54259 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
ATN1P54259 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
ATN1P54259 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.58■■□□□ 1.2
ATN1P54259 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.58■■□□□ 1.2
ATN1P54259 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ATN1P54259 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
ATN1P54259 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22.57■■□□□ 1.2
ATN1P54259 MIR1238-201ENST00000408483 83 ntBASIC22.57■■□□□ 1.2
ATN1P54259 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.57■■□□□ 1.2
ATN1P54259 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.57■■□□□ 1.2
ATN1P54259 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
ATN1P54259 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.56■■□□□ 1.2
ATN1P54259 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.56■■□□□ 1.2
ATN1P54259 LINC01568-207ENST00000641790 1380 ntBASIC22.56■■□□□ 1.2
ATN1P54259 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.56■■□□□ 1.2
ATN1P54259 AL353807.1-201ENST00000427475 662 ntBASIC22.56■■□□□ 1.2
ATN1P54259 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.56■■□□□ 1.2
ATN1P54259 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.56■■□□□ 1.2
ATN1P54259 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.56■■□□□ 1.2
ATN1P54259 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.56■■□□□ 1.2
ATN1P54259 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.56■■□□□ 1.2
ATN1P54259 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ATN1P54259 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
ATN1P54259 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ATN1P54259 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
ATN1P54259 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.55■■□□□ 1.2
ATN1P54259 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
ATN1P54259 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.55■■□□□ 1.2
ATN1P54259 NBPF21P-201ENST00000425093 1451 ntBASIC22.55■■□□□ 1.2
ATN1P54259 AC124283.5-201ENST00000624661 1809 ntBASIC22.55■■□□□ 1.2
ATN1P54259 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ATN1P54259 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.55■■□□□ 1.2
ATN1P54259 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.55■■□□□ 1.2
ATN1P54259 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ATN1P54259 AC113347.1-201ENST00000413321 391 ntBASIC22.55■■□□□ 1.2
ATN1P54259 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ATN1P54259 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.55■■□□□ 1.2
ATN1P54259 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.55■■□□□ 1.2
ATN1P54259 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.55■■□□□ 1.2
ATN1P54259 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC22.55■■□□□ 1.2
ATN1P54259 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
ATN1P54259 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ATN1P54259 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
ATN1P54259 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.55■■□□□ 1.2
ATN1P54259 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.54■■□□□ 1.2
ATN1P54259 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ATN1P54259 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ATN1P54259 UNC93B2-201ENST00000285383 730 ntBASIC22.54■■□□□ 1.2
ATN1P54259 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ATN1P54259 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ATN1P54259 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.54■■□□□ 1.2
ATN1P54259 AC073195.1-201ENST00000607241 877 ntBASIC22.54■■□□□ 1.2
ATN1P54259 REXO1L10P-201ENST00000615707 1290 ntBASIC22.54■■□□□ 1.2
ATN1P54259 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
ATN1P54259 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
ATN1P54259 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.54■■□□□ 1.2
ATN1P54259 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ATN1P54259 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.54■■□□□ 1.2
ATN1P54259 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATN1P54259 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATN1P54259 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATN1P54259 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
ATN1P54259 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATN1P54259 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.53■■□□□ 1.2
ATN1P54259 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.53■■□□□ 1.2
ATN1P54259 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ATN1P54259 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.53■■□□□ 1.2
ATN1P54259 NTF6B-201ENST00000591913 560 ntBASIC22.53■■□□□ 1.2
ATN1P54259 AL121829.2-201ENST00000620908 328 ntBASIC22.53■■□□□ 1.2
ATN1P54259 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATN1P54259 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATN1P54259 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.53■■□□□ 1.2
ATN1P54259 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ATN1P54259 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ATN1P54259 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.53■■□□□ 1.2
ATN1P54259 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ATN1P54259 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.52■■□□□ 1.2
ATN1P54259 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ATN1P54259 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.52■■□□□ 1.2
ATN1P54259 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ATN1P54259 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ATN1P54259 AL390955.1-201ENST00000428694 934 ntBASIC22.52■■□□□ 1.2
ATN1P54259 AL137013.1-201ENST00000432946 1228 ntBASIC22.52■■□□□ 1.2
ATN1P54259 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.52■■□□□ 1.2
ATN1P54259 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.52■■□□□ 1.2
ATN1P54259 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.52■■□□□ 1.2
ATN1P54259 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.52■■□□□ 1.2
ATN1P54259 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.52■■□□□ 1.2
ATN1P54259 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.52■■□□□ 1.2
ATN1P54259 NUDT16P1-203ENST00000513809 620 ntBASIC22.52■■□□□ 1.2
ATN1P54259 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC22.52■■□□□ 1.2
ATN1P54259 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.52■■□□□ 1.2
ATN1P54259 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
ATN1P54259 AL031963.3-201ENST00000606441 850 ntBASIC22.52■■□□□ 1.2
ATN1P54259 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms