Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ITGA8P53708 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.87■□□□□ 0.93
ITGA8P53708 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ITGA8P53708 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.87■□□□□ 0.93
ITGA8P53708 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.87■□□□□ 0.93
ITGA8P53708 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.87■□□□□ 0.93
ITGA8P53708 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ITGA8P53708 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.87■□□□□ 0.93
ITGA8P53708 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ITGA8P53708 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ITGA8P53708 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ITGA8P53708 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
ITGA8P53708 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ITGA8P53708 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ITGA8P53708 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ITGA8P53708 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ITGA8P53708 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
ITGA8P53708 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ITGA8P53708 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ITGA8P53708 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ITGA8P53708 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.86■□□□□ 0.93
ITGA8P53708 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ITGA8P53708 SUDS3P1-201ENST00000505831 966 ntBASIC20.86■□□□□ 0.93
ITGA8P53708 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ITGA8P53708 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.86■□□□□ 0.93
ITGA8P53708 AC120498.10-201ENST00000621827 505 ntBASIC20.86■□□□□ 0.93
ITGA8P53708 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ITGA8P53708 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ITGA8P53708 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.86■□□□□ 0.93
ITGA8P53708 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ITGA8P53708 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ITGA8P53708 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ITGA8P53708 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ITGA8P53708 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ITGA8P53708 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ITGA8P53708 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ITGA8P53708 RNF165-205ENST00000588679 2904 ntBASIC20.85■□□□□ 0.93
ITGA8P53708 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ITGA8P53708 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ITGA8P53708 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ITGA8P53708 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.85■□□□□ 0.93
ITGA8P53708 AC010141.2-201ENST00000452426 721 ntBASIC20.85■□□□□ 0.93
ITGA8P53708 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.85■□□□□ 0.93
ITGA8P53708 AC005837.3-201ENST00000612163 286 ntBASIC20.85■□□□□ 0.93
ITGA8P53708 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
ITGA8P53708 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ITGA8P53708 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.85■□□□□ 0.93
ITGA8P53708 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ITGA8P53708 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ITGA8P53708 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ITGA8P53708 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ITGA8P53708 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ITGA8P53708 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ITGA8P53708 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ITGA8P53708 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ITGA8P53708 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
ITGA8P53708 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ITGA8P53708 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.84■□□□□ 0.93
ITGA8P53708 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ITGA8P53708 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ITGA8P53708 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.84■□□□□ 0.93
ITGA8P53708 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.84■□□□□ 0.93
ITGA8P53708 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.84■□□□□ 0.93
ITGA8P53708 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ITGA8P53708 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ITGA8P53708 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ITGA8P53708 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ITGA8P53708 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.84■□□□□ 0.93
ITGA8P53708 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ITGA8P53708 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ITGA8P53708 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.83■□□□□ 0.93
ITGA8P53708 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ITGA8P53708 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ITGA8P53708 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ITGA8P53708 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
ITGA8P53708 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ITGA8P53708 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ITGA8P53708 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ITGA8P53708 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ITGA8P53708 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.83■□□□□ 0.93
ITGA8P53708 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ITGA8P53708 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ITGA8P53708 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ITGA8P53708 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.83■□□□□ 0.93
ITGA8P53708 SLC7A5P2-201ENST00000553010 536 ntBASIC20.83■□□□□ 0.93
ITGA8P53708 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.83■□□□□ 0.93
ITGA8P53708 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.83■□□□□ 0.93
ITGA8P53708 AC087289.5-201ENST00000586076 3175 ntBASIC20.83■□□□□ 0.93
ITGA8P53708 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ITGA8P53708 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ITGA8P53708 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
ITGA8P53708 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.83■□□□□ 0.92
ITGA8P53708 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ITGA8P53708 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.83■□□□□ 0.92
ITGA8P53708 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
ITGA8P53708 AL158211.5-201ENST00000623583 2518 ntBASIC20.82■□□□□ 0.92
ITGA8P53708 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ITGA8P53708 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.82■□□□□ 0.92
ITGA8P53708 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
ITGA8P53708 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms