Protein–RNA interactions for Protein: P49686

NUP42, Nucleoporin NUP42, yeastyeast

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP42P49686 YDR003W-AYDR003W-A 123 nt4.01□□□□□ -1.77
NUP42P49686 YLL007CYLL007C 1998 nt4.01□□□□□ -1.77
NUP42P49686 INP2YMR163C 2118 nt4.01□□□□□ -1.77
NUP42P49686 NOP53YPL146C 1368 nt4.01□□□□□ -1.77
NUP42P49686 GDB1YPR184W 4611 nt4□□□□□ -1.77
NUP42P49686 TSC11YER093C 4293 nt4□□□□□ -1.77
NUP42P49686 UBP11YKR098C 2154 nt3.99□□□□□ -1.77
NUP42P49686 SNF5YBR289W 2718 nt3.99□□□□□ -1.77
NUP42P49686 YEL073CYEL073C 324 nt3.99□□□□□ -1.77
NUP42P49686 YBL109WYBL109W 336 nt3.99□□□□□ -1.77
NUP42P49686 CRT10YOL063C 2874 nt3.99□□□□□ -1.77
NUP42P49686 PRP42YDR235W 1635 nt3.99□□□□□ -1.77
NUP42P49686 SSQ1YLR369W 1974 nt3.98□□□□□ -1.77
NUP42P49686 AUA1YFL010W-A 285 nt3.98□□□□□ -1.77
NUP42P49686 YOR218CYOR218C 420 nt3.98□□□□□ -1.77
NUP42P49686 VAC7YNL054W 3498 nt3.97□□□□□ -1.77
NUP42P49686 YPR022CYPR022C 3402 nt3.97□□□□□ -1.77
NUP42P49686 VPS35YJL154C 2835 nt3.97□□□□□ -1.77
NUP42P49686 PSF1YDR013W 627 nt3.97□□□□□ -1.77
NUP42P49686 RPL34BYIL052C 366 nt3.97□□□□□ -1.77
NUP42P49686 YLR146W-AYLR146W-A 189 nt3.97□□□□□ -1.77
NUP42P49686 RGM1YMR182C 636 nt3.97□□□□□ -1.77
NUP42P49686 RPL21BYPL079W 483 nt3.97□□□□□ -1.77
NUP42P49686 SMY1YKL079W 1971 nt3.96□□□□□ -1.77
NUP42P49686 RSN1YMR266W 2862 nt3.96□□□□□ -1.78
NUP42P49686 YDL022C-AYDL022C-A 249 nt3.96□□□□□ -1.78
NUP42P49686 UBC4YBR082C 447 nt3.96□□□□□ -1.78
NUP42P49686 YNR065CYNR065C 3351 nt3.96□□□□□ -1.78
NUP42P49686 ROG1YGL144C 2058 nt3.95□□□□□ -1.78
NUP42P49686 MLH2YLR035C 2088 nt3.95□□□□□ -1.78
NUP42P49686 HEH2YDR458C 1992 nt3.95□□□□□ -1.78
NUP42P49686 YBR184WYBR184W 1572 nt3.95□□□□□ -1.78
NUP42P49686 USE1YGL098W 738 nt3.95□□□□□ -1.78
NUP42P49686 ECM12YHR021W-A 456 nt3.95□□□□□ -1.78
NUP42P49686 VPS34YLR240W 2628 nt3.95□□□□□ -1.78
NUP42P49686 YPR089WYPR089W 2667 nt3.95□□□□□ -1.78
NUP42P49686 SEF1YBL066C 3447 nt3.95□□□□□ -1.78
NUP42P49686 GRR1YJR090C 3456 nt3.94□□□□□ -1.78
NUP42P49686 SWI6YLR182W 2412 nt3.93□□□□□ -1.78
NUP42P49686 GIS2YNL255C 462 nt3.93□□□□□ -1.78
NUP42P49686 YOR329W-AYOR329W-A 210 nt3.93□□□□□ -1.78
NUP42P49686 snR17bsnR17b 332 nt3.93□□□□□ -1.78
NUP42P49686 snR43snR43 209 nt3.93□□□□□ -1.78
NUP42P49686 YEL043WYEL043W 2871 nt3.93□□□□□ -1.78
NUP42P49686 YLR149CYLR149C 2193 nt3.93□□□□□ -1.78
NUP42P49686 MCM10YIL150C 1716 nt3.92□□□□□ -1.78
NUP42P49686 PUF3YLL013C 2640 nt3.91□□□□□ -1.78
NUP42P49686 RPA135YPR010C 3612 nt3.91□□□□□ -1.78
NUP42P49686 DPH6YLR143W 2058 nt3.91□□□□□ -1.78
NUP42P49686 TAF2YCR042C 4224 nt3.91□□□□□ -1.78
NUP42P49686 MCM7YBR202W 2538 nt3.91□□□□□ -1.78
NUP42P49686 ENA5YDR038C 3276 nt3.91□□□□□ -1.78
NUP42P49686 ENA2YDR039C 3276 nt3.91□□□□□ -1.78
NUP42P49686 ENA1YDR040C 3276 nt3.91□□□□□ -1.78
NUP42P49686 RPL28YGL103W 450 nt3.91□□□□□ -1.78
NUP42P49686 MET5YJR137C 4329 nt3.91□□□□□ -1.78
NUP42P49686 DNL4YOR005C 2835 nt3.9□□□□□ -1.78
NUP42P49686 DBP7YKR024C 2229 nt3.9□□□□□ -1.78
NUP42P49686 FAP7YDL166C 594 nt3.9□□□□□ -1.79
NUP42P49686 ULS1YOR191W 4860 nt3.9□□□□□ -1.79
NUP42P49686 VID22YLR373C 2706 nt3.89□□□□□ -1.79
NUP42P49686 FMP16YDR070C 282 nt3.89□□□□□ -1.79
NUP42P49686 KAP123YER110C 3342 nt3.89□□□□□ -1.79
NUP42P49686 SNT1YCR033W 3681 nt3.89□□□□□ -1.79
NUP42P49686 ELG1YOR144C 2376 nt3.88□□□□□ -1.79
NUP42P49686 GCR1YPL075W 2358 nt3.88□□□□□ -1.79
NUP42P49686 PSK1YAL017W 4071 nt3.87□□□□□ -1.79
NUP42P49686 RTT10YPL183C 3042 nt3.87□□□□□ -1.79
NUP42P49686 RPB10YOR210W 213 nt3.87□□□□□ -1.79
NUP42P49686 RPS12YOR369C 432 nt3.87□□□□□ -1.79
NUP42P49686 RSF2YJR127C 4143 nt3.87□□□□□ -1.79
NUP42P49686 ROT2YBR229C 2865 nt3.87□□□□□ -1.79
NUP42P49686 PXA2YKL188C 2562 nt3.86□□□□□ -1.79
NUP42P49686 YCR047W-AYCR047W-A 207 nt3.86□□□□□ -1.79
NUP42P49686 YHR210CYHR210C 1026 nt3.86□□□□□ -1.79
NUP42P49686 SLY1YDR189W 2001 nt3.86□□□□□ -1.79
NUP42P49686 RIC1YLR039C 3171 nt3.86□□□□□ -1.79
NUP42P49686 RSC30YHR056C 2652 nt3.86□□□□□ -1.79
NUP42P49686 PRP6YBR055C 2700 nt3.86□□□□□ -1.79
NUP42P49686 PEP3YLR148W 2757 nt3.85□□□□□ -1.79
NUP42P49686 YPK9YOR291W 4419 nt3.85□□□□□ -1.79
NUP42P49686 YLR154W-AYLR154W-A 186 nt3.85□□□□□ -1.79
NUP42P49686 PDR10YOR328W 4695 nt3.85□□□□□ -1.79
NUP42P49686 RAD2YGR258C 3096 nt3.84□□□□□ -1.79
NUP42P49686 CLN3YAL040C 1743 nt3.84□□□□□ -1.79
NUP42P49686 YLR012CYLR012C 300 nt3.84□□□□□ -1.79
NUP42P49686 RRP12YPL012W 3687 nt3.84□□□□□ -1.8
NUP42P49686 YGR022CYGR022C 330 nt3.83□□□□□ -1.8
NUP42P49686 YNR075C-AYNR075C-A 93 nt3.83□□□□□ -1.8
NUP42P49686 YOR072W-BYOR072W-B 162 nt3.83□□□□□ -1.8
NUP42P49686 TFC1YBR123C 1950 nt3.83□□□□□ -1.8
NUP42P49686 DSE4YNR067C 3354 nt3.82□□□□□ -1.8
NUP42P49686 YDL242WYDL242W 354 nt3.82□□□□□ -1.8
NUP42P49686 YIR044CYIR044C 186 nt3.82□□□□□ -1.8
NUP42P49686 ISA1YLL027W 753 nt3.82□□□□□ -1.8
NUP42P49686 RPL33BYOR234C 324 nt3.82□□□□□ -1.8
NUP42P49686 MGR2YPL098C 342 nt3.82□□□□□ -1.8
NUP42P49686 INP52YNL106C 3552 nt3.82□□□□□ -1.8
NUP42P49686 SWI1YPL016W 3945 nt3.81□□□□□ -1.8
NUP42P49686 YDR186CYDR186C 2634 nt3.81□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 94.1 ms