Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CENPAP49450 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CENPAP49450 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CENPAP49450 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.37■□□□□ 0.53
CENPAP49450 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPAP49450 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.37■□□□□ 0.53
CENPAP49450 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPAP49450 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPAP49450 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPAP49450 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CENPAP49450 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CENPAP49450 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPAP49450 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPAP49450 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.37■□□□□ 0.53
CENPAP49450 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CENPAP49450 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.37■□□□□ 0.53
CENPAP49450 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.37■□□□□ 0.53
CENPAP49450 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.37■□□□□ 0.53
CENPAP49450 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPAP49450 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.37■□□□□ 0.53
CENPAP49450 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPAP49450 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CENPAP49450 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPAP49450 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPAP49450 AC073314.1-201ENST00000568729 2216 ntBASIC18.37■□□□□ 0.53
CENPAP49450 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CENPAP49450 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CENPAP49450 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CENPAP49450 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CENPAP49450 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CENPAP49450 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CENPAP49450 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.36■□□□□ 0.53
CENPAP49450 KRT16P2-201ENST00000414673 1423 ntBASIC18.36■□□□□ 0.53
CENPAP49450 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.36■□□□□ 0.53
CENPAP49450 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.36■□□□□ 0.53
CENPAP49450 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CENPAP49450 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.36■□□□□ 0.53
CENPAP49450 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.36■□□□□ 0.53
CENPAP49450 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CENPAP49450 AC104187.1-201ENST00000607510 612 ntBASIC18.36■□□□□ 0.53
CENPAP49450 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CENPAP49450 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.35■□□□□ 0.53
CENPAP49450 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.35■□□□□ 0.53
CENPAP49450 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CENPAP49450 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPAP49450 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.35■□□□□ 0.53
CENPAP49450 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPAP49450 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPAP49450 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CENPAP49450 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPAP49450 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.35■□□□□ 0.53
CENPAP49450 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CENPAP49450 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPAP49450 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPAP49450 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.35■□□□□ 0.53
CENPAP49450 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CENPAP49450 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPAP49450 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.35■□□□□ 0.53
CENPAP49450 AC245052.3-201ENST00000450182 901 ntBASIC18.35■□□□□ 0.53
CENPAP49450 AC138907.5-202ENST00000569484 235 ntBASIC18.35■□□□□ 0.53
CENPAP49450 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.35■□□□□ 0.53
CENPAP49450 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.35■□□□□ 0.53
CENPAP49450 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.35■□□□□ 0.53
CENPAP49450 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CENPAP49450 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CENPAP49450 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CENPAP49450 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CENPAP49450 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CENPAP49450 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CENPAP49450 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CENPAP49450 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPAP49450 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CENPAP49450 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.34■□□□□ 0.53
CENPAP49450 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
CENPAP49450 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPAP49450 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPAP49450 PCDHAC2-203ENST00000615316 3011 ntBASIC18.34■□□□□ 0.53
CENPAP49450 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CENPAP49450 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.34■□□□□ 0.53
CENPAP49450 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPAP49450 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CENPAP49450 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPAP49450 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPAP49450 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CENPAP49450 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CENPAP49450 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPAP49450 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CENPAP49450 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPAP49450 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.34■□□□□ 0.53
CENPAP49450 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.34■□□□□ 0.53
CENPAP49450 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.34■□□□□ 0.53
CENPAP49450 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPAP49450 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.34■□□□□ 0.53
CENPAP49450 TERF1P2-201ENST00000583350 1212 ntBASIC18.34■□□□□ 0.53
CENPAP49450 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.34■□□□□ 0.53
CENPAP49450 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CENPAP49450 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.34■□□□□ 0.53
CENPAP49450 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPAP49450 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CENPAP49450 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms