Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 YCR108CYCR108C 192 nt0.45□□□□□ -2.34
TY1B-JR1P47098 YHR022CYHR022C 771 nt0.45□□□□□ -2.34
TY1B-JR1P47098 UFE1YOR075W 1041 nt0.45□□□□□ -2.34
TY1B-JR1P47098 DGR2YKL121W 2559 nt0.45□□□□□ -2.34
TY1B-JR1P47098 YIP1YGR172C 747 nt0.45□□□□□ -2.34
TY1B-JR1P47098 RPL6BYLR448W 531 nt0.45□□□□□ -2.34
TY1B-JR1P47098 HIR3YJR140C 4947 nt0.44□□□□□ -2.34
TY1B-JR1P47098 YCR015CYCR015C 954 nt0.44□□□□□ -2.34
TY1B-JR1P47098 YIR036W-AYIR036W-A 402 nt0.44□□□□□ -2.34
TY1B-JR1P47098 YNL010WYNL010W 726 nt0.44□□□□□ -2.34
TY1B-JR1P47098 YGR250CYGR250C 2346 nt0.43□□□□□ -2.34
TY1B-JR1P47098 LSM7YNL147W 348 nt0.43□□□□□ -2.34
TY1B-JR1P47098 MVP1YMR004W 1536 nt0.43□□□□□ -2.34
TY1B-JR1P47098 YCR102W-AYCR102W-A 198 nt0.42□□□□□ -2.34
TY1B-JR1P47098 ECM11YDR446W 909 nt0.42□□□□□ -2.34
TY1B-JR1P47098 YFR056CYFR056C 369 nt0.42□□□□□ -2.34
TY1B-JR1P47098 DSE2YHR143W 978 nt0.42□□□□□ -2.34
TY1B-JR1P47098 ALK1YGL021W 2283 nt0.42□□□□□ -2.34
TY1B-JR1P47098 SVP26YHR181W 687 nt0.42□□□□□ -2.34
TY1B-JR1P47098 BET5YML077W 480 nt0.42□□□□□ -2.34
TY1B-JR1P47098 snR191snR191 274 nt0.42□□□□□ -2.34
TY1B-JR1P47098 COX1Q0045 1605 nt0.41□□□□□ -2.34
TY1B-JR1P47098 PHO92YDR374C 921 nt0.41□□□□□ -2.34
TY1B-JR1P47098 YLR290CYLR290C 834 nt0.41□□□□□ -2.34
TY1B-JR1P47098 NCA2YPR155C 1851 nt0.41□□□□□ -2.34
TY1B-JR1P47098 YLL007CYLL007C 1998 nt0.4□□□□□ -2.34
TY1B-JR1P47098 TAN1YGL232W 870 nt0.4□□□□□ -2.35
TY1B-JR1P47098 RPL38YLR325C 237 nt0.4□□□□□ -2.35
TY1B-JR1P47098 LYS14YDR034C 2373 nt0.4□□□□□ -2.35
TY1B-JR1P47098 MUM3YOR298W 1440 nt0.4□□□□□ -2.35
TY1B-JR1P47098 AZF1YOR113W 2745 nt0.4□□□□□ -2.35
TY1B-JR1P47098 YDR042CYDR042C 603 nt0.39□□□□□ -2.35
TY1B-JR1P47098 YGL118CYGL118C 438 nt0.39□□□□□ -2.35
TY1B-JR1P47098 YLL054CYLL054C 2532 nt0.38□□□□□ -2.35
TY1B-JR1P47098 YEL009C-AYEL009C-A 408 nt0.38□□□□□ -2.35
TY1B-JR1P47098 PRS3YHL011C 963 nt0.38□□□□□ -2.35
TY1B-JR1P47098 EPT1YHR123W 1176 nt0.38□□□□□ -2.35
TY1B-JR1P47098 CMC2YBL059C-A 330 nt0.38□□□□□ -2.35
TY1B-JR1P47098 PFK27YOL136C 1194 nt0.38□□□□□ -2.35
TY1B-JR1P47098 snR45snR45 172 nt0.38□□□□□ -2.35
TY1B-JR1P47098 YHL009W-AYHL009W-A 1242 nt0.37□□□□□ -2.35
TY1B-JR1P47098 HYR1YIR037W 492 nt0.37□□□□□ -2.35
TY1B-JR1P47098 ABM1YJR108W 372 nt0.37□□□□□ -2.35
TY1B-JR1P47098 SNA4YDL123W 423 nt0.37□□□□□ -2.35
TY1B-JR1P47098 RRG1YDR065W 1098 nt0.37□□□□□ -2.35
TY1B-JR1P47098 YDR210W-AYDR210W-A 1317 nt0.37□□□□□ -2.35
TY1B-JR1P47098 EDC1YGL222C 528 nt0.37□□□□□ -2.35
TY1B-JR1P47098 FYV4YHR059W 393 nt0.37□□□□□ -2.35
TY1B-JR1P47098 CYB5YNL111C 363 nt0.37□□□□□ -2.35
TY1B-JR1P47098 YOR343W-AYOR343W-A 1317 nt0.37□□□□□ -2.35
TY1B-JR1P47098 NUT1YGL151W 3399 nt0.36□□□□□ -2.35
TY1B-JR1P47098 YMR178WYMR178W 825 nt0.36□□□□□ -2.35
TY1B-JR1P47098 MRPL40YPL173W 894 nt0.36□□□□□ -2.35
TY1B-JR1P47098 CDC5YMR001C 2118 nt0.36□□□□□ -2.35
TY1B-JR1P47098 DSE1YER124C 1722 nt0.36□□□□□ -2.35
TY1B-JR1P47098 YER088C-AYER088C-A 324 nt0.35□□□□□ -2.35
TY1B-JR1P47098 YGL138CYGL138C 1038 nt0.35□□□□□ -2.35
TY1B-JR1P47098 MER1YNL210W 813 nt0.35□□□□□ -2.35
TY1B-JR1P47098 YDR248CYDR248C 582 nt0.34□□□□□ -2.35
TY1B-JR1P47098 YJL026C-AYJL026C-A 222 nt0.34□□□□□ -2.35
TY1B-JR1P47098 SEC22YLR268W 645 nt0.34□□□□□ -2.35
TY1B-JR1P47098 RPS10AYOR293W 318 nt0.34□□□□□ -2.35
TY1B-JR1P47098 YGR114CYGR114C 390 nt0.34□□□□□ -2.36
TY1B-JR1P47098 LTO1YNL260C 597 nt0.34□□□□□ -2.36
TY1B-JR1P47098 ALG5YPL227C 1005 nt0.34□□□□□ -2.36
TY1B-JR1P47098 MGR1YCL044C 1254 nt0.34□□□□□ -2.36
TY1B-JR1P47098 URB1YKL014C 5295 nt0.34□□□□□ -2.36
TY1B-JR1P47098 YDR286CYDR286C 345 nt0.33□□□□□ -2.36
TY1B-JR1P47098 RPL9AYGL147C 576 nt0.33□□□□□ -2.36
TY1B-JR1P47098 SMB1YER029C 591 nt0.32□□□□□ -2.36
TY1B-JR1P47098 SMD1YGR074W 441 nt0.32□□□□□ -2.36
TY1B-JR1P47098 ICS2YBR157C 768 nt0.32□□□□□ -2.36
TY1B-JR1P47098 SRB4YER022W 2064 nt0.32□□□□□ -2.36
TY1B-JR1P47098 UPF3YGR072W 1164 nt0.32□□□□□ -2.36
TY1B-JR1P47098 ADF1YCL058W-A 342 nt0.32□□□□□ -2.36
TY1B-JR1P47098 FIG1YBR040W 897 nt0.31□□□□□ -2.36
TY1B-JR1P47098 PRM8YGL053W 714 nt0.3□□□□□ -2.36
TY1B-JR1P47098 ECM12YHR021W-A 456 nt0.3□□□□□ -2.36
TY1B-JR1P47098 RAM2YKL019W 951 nt0.3□□□□□ -2.36
TY1B-JR1P47098 ARL3YPL051W 597 nt0.3□□□□□ -2.36
TY1B-JR1P47098 NUP188YML103C 4968 nt0.3□□□□□ -2.36
TY1B-JR1P47098 AIM9YER080W 1884 nt0.3□□□□□ -2.36
TY1B-JR1P47098 BPH1YCR032W 6504 nt0.3□□□□□ -2.36
TY1B-JR1P47098 SPO77YLR341W 1434 nt0.3□□□□□ -2.36
TY1B-JR1P47098 STB6YKL072W 2301 nt0.3□□□□□ -2.36
TY1B-JR1P47098 SPO12YHR152W 522 nt0.29□□□□□ -2.36
TY1B-JR1P47098 YIL141WYIL141W 390 nt0.29□□□□□ -2.36
TY1B-JR1P47098 YET2YMR040W 483 nt0.29□□□□□ -2.36
TY1B-JR1P47098 IRC14YOR135C 342 nt0.29□□□□□ -2.36
TY1B-JR1P47098 ESP1YGR098C 4893 nt0.29□□□□□ -2.36
TY1B-JR1P47098 SLU7YDR088C 1149 nt0.29□□□□□ -2.36
TY1B-JR1P47098 NGG1YDR176W 2109 nt0.28□□□□□ -2.36
TY1B-JR1P47098 NUP120YKL057C 3114 nt0.28□□□□□ -2.36
TY1B-JR1P47098 YDR261W-AYDR261W-A 1317 nt0.28□□□□□ -2.37
TY1B-JR1P47098 SLY1YDR189W 2001 nt0.28□□□□□ -2.37
TY1B-JR1P47098 HOP2YGL033W 657 nt0.27□□□□□ -2.37
TY1B-JR1P47098 YAR053WYAR053W 297 nt0.27□□□□□ -2.37
TY1B-JR1P47098 SAY1YGR263C 1275 nt0.27□□□□□ -2.37
TY1B-JR1P47098 FYV6YNL133C 522 nt0.27□□□□□ -2.37
TY1B-JR1P47098 CIN2YPL241C 807 nt0.27□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 9.3 ms