Protein–RNA interactions for Protein: P40048

PTP3, Tyrosine-protein phosphatase 3, yeastyeast

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PTP3P40048 tQ(UUG)E1tQ(UUG)E1 72 nt5.27□□□□□ -1.57
PTP3P40048 tQ(UUG)HtQ(UUG)H 72 nt5.27□□□□□ -1.57
PTP3P40048 tQ(UUG)LtQ(UUG)L 72 nt5.27□□□□□ -1.57
PTP3P40048 ACM1YPL267W 630 nt5.27□□□□□ -1.57
PTP3P40048 YBR277CYBR277C 402 nt5.27□□□□□ -1.57
PTP3P40048 GIN4YDR507C 3429 nt5.26□□□□□ -1.57
PTP3P40048 YPR014CYPR014C 330 nt5.26□□□□□ -1.57
PTP3P40048 NSP1YJL041W 2472 nt5.26□□□□□ -1.57
PTP3P40048 TOP1YOL006C 2310 nt5.26□□□□□ -1.57
PTP3P40048 DBF4YDR052C 2115 nt5.26□□□□□ -1.57
PTP3P40048 TFC8YPL007C 1767 nt5.25□□□□□ -1.57
PTP3P40048 YER053C-AYER053C-A 114 nt5.25□□□□□ -1.57
PTP3P40048 PEX1YKL197C 3132 nt5.25□□□□□ -1.57
PTP3P40048 HSP104YLL026W 2727 nt5.25□□□□□ -1.57
PTP3P40048 RIM15YFL033C 5313 nt5.24□□□□□ -1.57
PTP3P40048 MSH2YOL090W 2895 nt5.24□□□□□ -1.57
PTP3P40048 PRE4YFR050C 801 nt5.24□□□□□ -1.57
PTP3P40048 PDR12YPL058C 4536 nt5.24□□□□□ -1.57
PTP3P40048 HSC82YMR186W 2118 nt5.24□□□□□ -1.57
PTP3P40048 COG3YER157W 2406 nt5.24□□□□□ -1.57
PTP3P40048 DIP2YLR129W 2832 nt5.23□□□□□ -1.57
PTP3P40048 YGL024WYGL024W 336 nt5.23□□□□□ -1.57
PTP3P40048 YGL041C-BYGL041C-B 183 nt5.23□□□□□ -1.57
PTP3P40048 YGL069CYGL069C 465 nt5.23□□□□□ -1.57
PTP3P40048 YIL174WYIL174W 228 nt5.23□□□□□ -1.57
PTP3P40048 YJL222W-AYJL222W-A 228 nt5.23□□□□□ -1.57
PTP3P40048 YNL211CYNL211C 261 nt5.23□□□□□ -1.57
PTP3P40048 PLC1YPL268W 2610 nt5.23□□□□□ -1.57
PTP3P40048 ZRG17YNR039C 1818 nt5.23□□□□□ -1.57
PTP3P40048 YDR182W-AYDR182W-A 204 nt5.22□□□□□ -1.57
PTP3P40048 YHL015W-AYHL015W-A 84 nt5.22□□□□□ -1.57
PTP3P40048 FPR1YNL135C 345 nt5.22□□□□□ -1.57
PTP3P40048 DUR1,2YBR208C 5508 nt5.22□□□□□ -1.57
PTP3P40048 snR45snR45 172 nt5.22□□□□□ -1.57
PTP3P40048 YAK1YJL141C 2424 nt5.21□□□□□ -1.58
PTP3P40048 JEN1YKL217W 1851 nt5.21□□□□□ -1.58
PTP3P40048 COY1YKL179C 2040 nt5.21□□□□□ -1.58
PTP3P40048 EMC6YLL014W 327 nt5.2□□□□□ -1.58
PTP3P40048 snR7-SsnR7-S 179 nt5.19□□□□□ -1.58
PTP3P40048 tS(GCU)Q1tS(GCU)Q1 86 nt5.19□□□□□ -1.58
PTP3P40048 IOC2YLR095C 2439 nt5.18□□□□□ -1.58
PTP3P40048 DUF1YOL087C 3351 nt5.18□□□□□ -1.58
PTP3P40048 snR62snR62 100 nt5.18□□□□□ -1.58
PTP3P40048 RAM2YKL019W 951 nt5.18□□□□□ -1.58
PTP3P40048 ISA1YLL027W 753 nt5.18□□□□□ -1.58
PTP3P40048 YMR324CYMR324C 243 nt5.18□□□□□ -1.58
PTP3P40048 YLR352WYLR352W 2424 nt5.17□□□□□ -1.58
PTP3P40048 YPL260WYPL260W 1656 nt5.17□□□□□ -1.58
PTP3P40048 YTA7YGR270W 4140 nt5.16□□□□□ -1.58
PTP3P40048 YLR154W-AYLR154W-A 186 nt5.16□□□□□ -1.58
PTP3P40048 YOR333CYOR333C 417 nt5.16□□□□□ -1.58
PTP3P40048 snR17bsnR17b 332 nt5.16□□□□□ -1.58
PTP3P40048 CFT2YLR115W 2580 nt5.16□□□□□ -1.58
PTP3P40048 RSF2YJR127C 4143 nt5.16□□□□□ -1.58
PTP3P40048 DBP7YKR024C 2229 nt5.16□□□□□ -1.58
PTP3P40048 GPI13YLL031C 3054 nt5.15□□□□□ -1.58
PTP3P40048 HAL9YOL089C 3093 nt5.15□□□□□ -1.58
PTP3P40048 NUP133YKR082W 3474 nt5.15□□□□□ -1.58
PTP3P40048 VPS3YDR495C 3036 nt5.15□□□□□ -1.58
PTP3P40048 YEL032C-AYEL032C-A 162 nt5.15□□□□□ -1.59
PTP3P40048 YOR345CYOR345C 351 nt5.15□□□□□ -1.59
PTP3P40048 YBR225WYBR225W 2703 nt5.15□□□□□ -1.59
PTP3P40048 ALK2YBL009W 2031 nt5.14□□□□□ -1.59
PTP3P40048 VBA4YDR119W 2307 nt5.14□□□□□ -1.59
PTP3P40048 KAR3YPR141C 2190 nt5.14□□□□□ -1.59
PTP3P40048 AUA1YFL010W-A 285 nt5.14□□□□□ -1.59
PTP3P40048 ERB1YMR049C 2424 nt5.13□□□□□ -1.59
PTP3P40048 SIR3YLR442C 2937 nt5.13□□□□□ -1.59
PTP3P40048 YOR218CYOR218C 420 nt5.13□□□□□ -1.59
PTP3P40048 SNU114YKL173W 3027 nt5.13□□□□□ -1.59
PTP3P40048 TAF2YCR042C 4224 nt5.12□□□□□ -1.59
PTP3P40048 EXO84YBR102C 2262 nt5.12□□□□□ -1.59
PTP3P40048 MCM10YIL150C 1716 nt5.12□□□□□ -1.59
PTP3P40048 PAA1YDR071C 576 nt5.12□□□□□ -1.59
PTP3P40048 RNR1YER070W 2667 nt5.12□□□□□ -1.59
PTP3P40048 FLO10YKR102W 3510 nt5.11□□□□□ -1.59
PTP3P40048 YGR125WYGR125W 3111 nt5.11□□□□□ -1.59
PTP3P40048 HMG1YML075C 3165 nt5.11□□□□□ -1.59
PTP3P40048 SAK1YER129W 3429 nt5.11□□□□□ -1.59
PTP3P40048 SMC2YFR031C 3513 nt5.11□□□□□ -1.59
PTP3P40048 BRE4YDL231C 3378 nt5.1□□□□□ -1.59
PTP3P40048 OST4YDL232W 111 nt5.1□□□□□ -1.59
PTP3P40048 SOK1YDR006C 2706 nt5.1□□□□□ -1.59
PTP3P40048 CLN3YAL040C 1743 nt5.1□□□□□ -1.59
PTP3P40048 TCB3YML072C 4638 nt5.1□□□□□ -1.59
PTP3P40048 MET10YFR030W 3108 nt5.1□□□□□ -1.59
PTP3P40048 DOT6YER088C 2013 nt5.09□□□□□ -1.59
PTP3P40048 PSO2YMR137C 1986 nt5.09□□□□□ -1.59
PTP3P40048 CPA2YJR109C 3357 nt5.09□□□□□ -1.59
PTP3P40048 RPL33AYPL143W 324 nt5.09□□□□□ -1.59
PTP3P40048 VPS53YJL029C 2469 nt5.09□□□□□ -1.59
PTP3P40048 ABP140YOR239W 1887 nt5.09□□□□□ -1.6
PTP3P40048 EMC1YCL045C 2283 nt5.08□□□□□ -1.6
PTP3P40048 TMA108YIL137C 2841 nt5.08□□□□□ -1.6
PTP3P40048 PAN3YKL025C 2040 nt5.07□□□□□ -1.6
PTP3P40048 PAU10YDR542W 363 nt5.07□□□□□ -1.6
PTP3P40048 PAU11YGL261C 363 nt5.07□□□□□ -1.6
PTP3P40048 ATP7YKL016C 525 nt5.07□□□□□ -1.6
PTP3P40048 PAU4YLR461W 363 nt5.07□□□□□ -1.6
PTP3P40048 YBR206WYBR206W 324 nt5.07□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 18.3 ms