Protein–RNA interactions for Protein: P39986

SPF1, Manganese-transporting ATPase 1, yeastyeast

Known RBP Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPF1P39986 SPO71YDR104C 3738 nt3.11□□□□□ -1.91
SPF1P39986 SPO14YKR031C 5052 nt3.11□□□□□ -1.91
SPF1P39986 RKM1YPL208W 1752 nt3.11□□□□□ -1.91
SPF1P39986 RPL14BYHL001W 417 nt3.11□□□□□ -1.91
SPF1P39986 GRX8YLR364W 330 nt3.11□□□□□ -1.91
SPF1P39986 YBR121C-AYBR121C-A 159 nt3.11□□□□□ -1.91
SPF1P39986 snR42snR42 351 nt3.11□□□□□ -1.91
SPF1P39986 RPN1YHR027C 2982 nt3.11□□□□□ -1.91
SPF1P39986 NOT5YPR072W 1683 nt3.11□□□□□ -1.91
SPF1P39986 YMR317WYMR317W 3423 nt3.1□□□□□ -1.91
SPF1P39986 RTC6YPL183W-A 282 nt3.1□□□□□ -1.91
SPF1P39986 SDC25YLL016W 3147 nt3.1□□□□□ -1.91
SPF1P39986 GIS4YML006C 2325 nt3.09□□□□□ -1.91
SPF1P39986 SGD1YLR336C 2700 nt3.09□□□□□ -1.91
SPF1P39986 FMP16YDR070C 282 nt3.09□□□□□ -1.91
SPF1P39986 QCR7YDR529C 384 nt3.09□□□□□ -1.91
SPF1P39986 YMR290W-AYMR290W-A 348 nt3.09□□□□□ -1.91
SPF1P39986 YBR085C-AYBR085C-A 258 nt3.09□□□□□ -1.91
SPF1P39986 CIN8YEL061C 3003 nt3.09□□□□□ -1.92
SPF1P39986 SNU114YKL173W 3027 nt3.09□□□□□ -1.92
SPF1P39986 ROM1YGR070W 3468 nt3.08□□□□□ -1.92
SPF1P39986 HRD3YLR207W 2502 nt3.08□□□□□ -1.92
SPF1P39986 HMRA2YCR096C 360 nt3.08□□□□□ -1.92
SPF1P39986 YHR007C-AYHR007C-A 216 nt3.08□□□□□ -1.92
SPF1P39986 RPS27AYKL156W 249 nt3.08□□□□□ -1.92
SPF1P39986 RPL36AYMR194W 303 nt3.08□□□□□ -1.92
SPF1P39986 YOR072W-AYOR072W-A 249 nt3.08□□□□□ -1.92
SPF1P39986 SIN3YOL004W 4611 nt3.07□□□□□ -1.92
SPF1P39986 FLO1YAR050W 4614 nt3.07□□□□□ -1.92
SPF1P39986 SOK2YMR016C 2358 nt3.07□□□□□ -1.92
SPF1P39986 snR8snR8 190 nt3.07□□□□□ -1.92
SPF1P39986 YFL063WYFL063W 456 nt3.07□□□□□ -1.92
SPF1P39986 HCH1YNL281W 462 nt3.07□□□□□ -1.92
SPF1P39986 DIS3YOL021C 3006 nt3.07□□□□□ -1.92
SPF1P39986 SGO1YOR073W 1773 nt3.07□□□□□ -1.92
SPF1P39986 RRP12YPL012W 3687 nt3.07□□□□□ -1.92
SPF1P39986 RCY1YJL204C 2523 nt3.07□□□□□ -1.92
SPF1P39986 RGA2YDR379W 3030 nt3.06□□□□□ -1.92
SPF1P39986 GCN4YEL009C 846 nt3.06□□□□□ -1.92
SPF1P39986 DOT6YER088C 2013 nt3.06□□□□□ -1.92
SPF1P39986 SNQ2YDR011W 4506 nt3.05□□□□□ -1.92
SPF1P39986 NUP120YKL057C 3114 nt3.05□□□□□ -1.92
SPF1P39986 tC(GCA)BtC(GCA)B 72 nt3.05□□□□□ -1.92
SPF1P39986 tC(GCA)GtC(GCA)G 72 nt3.05□□□□□ -1.92
SPF1P39986 tC(GCA)P1tC(GCA)P1 72 nt3.05□□□□□ -1.92
SPF1P39986 tC(GCA)P2tC(GCA)P2 72 nt3.05□□□□□ -1.92
SPF1P39986 YMR320WYMR320W 306 nt3.05□□□□□ -1.92
SPF1P39986 YDR186CYDR186C 2634 nt3.05□□□□□ -1.92
SPF1P39986 BUD4YJR092W 4344 nt3.04□□□□□ -1.92
SPF1P39986 SNC2YOR327C 348 nt3.04□□□□□ -1.92
SPF1P39986 YPR010C-AYPR010C-A 219 nt3.04□□□□□ -1.92
SPF1P39986 VPS16YPL045W 2397 nt3.04□□□□□ -1.92
SPF1P39986 YHR063W-AYHR063W-A 336 nt3.03□□□□□ -1.92
SPF1P39986 TAR1YLR154W-C 375 nt3.03□□□□□ -1.92
SPF1P39986 TMA10YLR327C 261 nt3.03□□□□□ -1.92
SPF1P39986 OSW7YFR039C 1533 nt3.03□□□□□ -1.92
SPF1P39986 OST1YJL002C 1431 nt3.02□□□□□ -1.93
SPF1P39986 VPS35YJL154C 2835 nt3.02□□□□□ -1.93
SPF1P39986 POL3YDL102W 3294 nt3.02□□□□□ -1.93
SPF1P39986 tF(GAA)DtF(GAA)D 73 nt3.02□□□□□ -1.93
SPF1P39986 tF(GAA)NtF(GAA)N 73 nt3.02□□□□□ -1.93
SPF1P39986 RPL32YBL092W 393 nt3.02□□□□□ -1.93
SPF1P39986 YPR099CYPR099C 357 nt3.02□□□□□ -1.93
SPF1P39986 KAP123YER110C 3342 nt3.01□□□□□ -1.93
SPF1P39986 YBT1YLL048C 4986 nt3.01□□□□□ -1.93
SPF1P39986 INP53YOR109W 3324 nt3.01□□□□□ -1.93
SPF1P39986 RBK1YCR036W 1002 nt3.01□□□□□ -1.93
SPF1P39986 YGL149WYGL149W 306 nt3.01□□□□□ -1.93
SPF1P39986 PHD1YKL043W 1101 nt3.01□□□□□ -1.93
SPF1P39986 YAL042C-AYAL042C-A 378 nt3.01□□□□□ -1.93
SPF1P39986 BFA1YJR053W 1725 nt3.01□□□□□ -1.93
SPF1P39986 ACB1YGR037C 264 nt3□□□□□ -1.93
SPF1P39986 FUN30YAL019W 3396 nt3□□□□□ -1.93
SPF1P39986 TAE2YPL009C 3117 nt3□□□□□ -1.93
SPF1P39986 DRS2YAL026C 4068 nt2.99□□□□□ -1.93
SPF1P39986 PAC1YOR269W 1485 nt2.99□□□□□ -1.93
SPF1P39986 DYN1YKR054C 12279 nt2.99□□□□□ -1.93
SPF1P39986 RPL35AYDL191W 363 nt2.99□□□□□ -1.93
SPF1P39986 DYN2YDR424C 279 nt2.99□□□□□ -1.93
SPF1P39986 YEL057CYEL057C 702 nt2.99□□□□□ -1.93
SPF1P39986 SMD1YGR074W 441 nt2.99□□□□□ -1.93
SPF1P39986 YIL059CYIL059C 366 nt2.99□□□□□ -1.93
SPF1P39986 VMA9YCL005W-A 222 nt2.99□□□□□ -1.93
SPF1P39986 KAP104YBR017C 2757 nt2.99□□□□□ -1.93
SPF1P39986 YGR067CYGR067C 2415 nt2.99□□□□□ -1.93
SPF1P39986 RGC1YPR115W 3252 nt2.99□□□□□ -1.93
SPF1P39986 RSN1YMR266W 2862 nt2.98□□□□□ -1.93
SPF1P39986 TOF2YKR010C 2316 nt2.98□□□□□ -1.93
SPF1P39986 YIL082W-AYIL082W-A 4497 nt2.98□□□□□ -1.93
SPF1P39986 RIF1YBR275C 5751 nt2.98□□□□□ -1.93
SPF1P39986 NOP10YHR072W-A 177 nt2.98□□□□□ -1.93
SPF1P39986 YJL222W-BYJL222W-B 138 nt2.98□□□□□ -1.93
SPF1P39986 APC9YLR102C 798 nt2.98□□□□□ -1.93
SPF1P39986 YBR277CYBR277C 402 nt2.98□□□□□ -1.93
SPF1P39986 CAF120YNL278W 3183 nt2.98□□□□□ -1.93
SPF1P39986 DFG16YOR030W 1860 nt2.98□□□□□ -1.93
SPF1P39986 RTT10YPL183C 3042 nt2.98□□□□□ -1.93
SPF1P39986 TAO3YIL129C 7131 nt2.97□□□□□ -1.93
SPF1P39986 tQ(UUG)BtQ(UUG)B 72 nt2.97□□□□□ -1.93
SPF1P39986 FRE2YKL220C 2136 nt2.97□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 107 ms