Protein–RNA interactions for Protein: P38848

PEX28, Peroxisomal membrane protein PEX28, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX28P38848 LSO2YGR169C-A 279 nt3.32□□□□□ -1.88
PEX28P38848 YNL010WYNL010W 726 nt3.32□□□□□ -1.88
PEX28P38848 YOL160WYOL160W 342 nt3.32□□□□□ -1.88
PEX28P38848 RIX1YHR197W 2292 nt3.32□□□□□ -1.88
PEX28P38848 CDC20YGL116W 1833 nt3.31□□□□□ -1.88
PEX28P38848 YDR464C-AYDR464C-A 189 nt3.31□□□□□ -1.88
PEX28P38848 QCR7YDR529C 384 nt3.31□□□□□ -1.88
PEX28P38848 YLR053CYLR053C 327 nt3.31□□□□□ -1.88
PEX28P38848 RPL25YOL127W 429 nt3.31□□□□□ -1.88
PEX28P38848 YBR064WYBR064W 429 nt3.31□□□□□ -1.88
PEX28P38848 POL3YDL102W 3294 nt3.31□□□□□ -1.88
PEX28P38848 NUP120YKL057C 3114 nt3.31□□□□□ -1.88
PEX28P38848 APE2YKL157W 2859 nt3.31□□□□□ -1.88
PEX28P38848 RPA135YPR010C 3612 nt3.31□□□□□ -1.88
PEX28P38848 PUF4YGL014W 2667 nt3.3□□□□□ -1.88
PEX28P38848 YGL024WYGL024W 336 nt3.3□□□□□ -1.88
PEX28P38848 YLR466C-BYLR466C-B 117 nt3.3□□□□□ -1.88
PEX28P38848 RPL36AYMR194W 303 nt3.3□□□□□ -1.88
PEX28P38848 RPS8AYBL072C 603 nt3.3□□□□□ -1.88
PEX28P38848 RIM20YOR275C 1986 nt3.3□□□□□ -1.88
PEX28P38848 RSE1YML049C 4086 nt3.3□□□□□ -1.88
PEX28P38848 ITC1YGL133W 3795 nt3.3□□□□□ -1.88
PEX28P38848 URA2YJL130C 6645 nt3.29□□□□□ -1.88
PEX28P38848 KAR3YPR141C 2190 nt3.29□□□□□ -1.88
PEX28P38848 TAF2YCR042C 4224 nt3.29□□□□□ -1.88
PEX28P38848 BAS1YKR099W 2436 nt3.29□□□□□ -1.88
PEX28P38848 YGR151CYGR151C 336 nt3.29□□□□□ -1.88
PEX28P38848 IES4YOR189W 351 nt3.29□□□□□ -1.88
PEX28P38848 SPT6YGR116W 4356 nt3.28□□□□□ -1.88
PEX28P38848 RBK1YCR036W 1002 nt3.28□□□□□ -1.88
PEX28P38848 YIL059CYIL059C 366 nt3.28□□□□□ -1.88
PEX28P38848 PFD1YJL179W 330 nt3.28□□□□□ -1.88
PEX28P38848 YJL222W-BYJL222W-B 138 nt3.28□□□□□ -1.88
PEX28P38848 YMR230W-AYMR230W-A 189 nt3.28□□□□□ -1.88
PEX28P38848 SAR1YPL218W 573 nt3.28□□□□□ -1.88
PEX28P38848 YBR197CYBR197C 654 nt3.28□□□□□ -1.88
PEX28P38848 DUF1YOL087C 3351 nt3.28□□□□□ -1.89
PEX28P38848 SQS1YNL224C 2304 nt3.27□□□□□ -1.89
PEX28P38848 DBP10YDL031W 2988 nt3.27□□□□□ -1.89
PEX28P38848 SPT4YGR063C 309 nt3.27□□□□□ -1.89
PEX28P38848 YBL008W-AYBL008W-A 240 nt3.27□□□□□ -1.89
PEX28P38848 COX14YML129C 213 nt3.27□□□□□ -1.89
PEX28P38848 YHR080CYHR080C 4038 nt3.27□□□□□ -1.89
PEX28P38848 ALA1YOR335C 2877 nt3.27□□□□□ -1.89
PEX28P38848 ENA5YDR038C 3276 nt3.27□□□□□ -1.89
PEX28P38848 ENA2YDR039C 3276 nt3.27□□□□□ -1.89
PEX28P38848 ENA1YDR040C 3276 nt3.27□□□□□ -1.89
PEX28P38848 YPR022CYPR022C 3402 nt3.26□□□□□ -1.89
PEX28P38848 FLO9YAL063C 3969 nt3.26□□□□□ -1.89
PEX28P38848 NAB6YML117W 3405 nt3.26□□□□□ -1.89
PEX28P38848 YLL032CYLL032C 2478 nt3.26□□□□□ -1.89
PEX28P38848 snR55snR55 98 nt3.26□□□□□ -1.89
PEX28P38848 IPT1YDR072C 1584 nt3.25□□□□□ -1.89
PEX28P38848 TRS120YDR407C 3870 nt3.25□□□□□ -1.89
PEX28P38848 SAK1YER129W 3429 nt3.25□□□□□ -1.89
PEX28P38848 RPS28BYLR264W 204 nt3.25□□□□□ -1.89
PEX28P38848 GOT1YMR292W 417 nt3.25□□□□□ -1.89
PEX28P38848 YOR011W-AYOR011W-A 207 nt3.25□□□□□ -1.89
PEX28P38848 REC8YPR007C 2043 nt3.25□□□□□ -1.89
PEX28P38848 YJL070CYJL070C 2667 nt3.25□□□□□ -1.89
PEX28P38848 AI2Q0055 2565 nt3.24□□□□□ -1.89
PEX28P38848 RLI1YDR091C 1827 nt3.24□□□□□ -1.89
PEX28P38848 YGL014C-AYGL014C-A 162 nt3.24□□□□□ -1.89
PEX28P38848 PHS1YJL097W 654 nt3.24□□□□□ -1.89
PEX28P38848 RPA34YJL148W 702 nt3.24□□□□□ -1.89
PEX28P38848 MRPL33YMR286W 261 nt3.24□□□□□ -1.89
PEX28P38848 HHT1YBR010W 411 nt3.24□□□□□ -1.89
PEX28P38848 MET5YJR137C 4329 nt3.24□□□□□ -1.89
PEX28P38848 IKI3YLR384C 4050 nt3.23□□□□□ -1.89
PEX28P38848 YHL041WYHL041W 450 nt3.23□□□□□ -1.89
PEX28P38848 MTR4YJL050W 3222 nt3.23□□□□□ -1.89
PEX28P38848 YAK1YJL141C 2424 nt3.23□□□□□ -1.89
PEX28P38848 TAF1YGR274C 3201 nt3.23□□□□□ -1.89
PEX28P38848 PSY2YNL201C 2577 nt3.22□□□□□ -1.89
PEX28P38848 snR76snR76 109 nt3.22□□□□□ -1.89
PEX28P38848 YLR154W-EYLR154W-E 204 nt3.22□□□□□ -1.89
PEX28P38848 RPL38YLR325C 237 nt3.22□□□□□ -1.89
PEX28P38848 YPR063CYPR063C 423 nt3.22□□□□□ -1.89
PEX28P38848 YPR108W-AYPR108W-A 213 nt3.22□□□□□ -1.89
PEX28P38848 ORC1YML065W 2745 nt3.22□□□□□ -1.89
PEX28P38848 DOT6YER088C 2013 nt3.22□□□□□ -1.89
PEX28P38848 OSH3YHR073W 2991 nt3.21□□□□□ -1.89
PEX28P38848 NPC2YDL046W 522 nt3.21□□□□□ -1.9
PEX28P38848 DLS1YJL065C 504 nt3.21□□□□□ -1.9
PEX28P38848 RGM1YMR182C 636 nt3.21□□□□□ -1.9
PEX28P38848 RTC6YPL183W-A 282 nt3.21□□□□□ -1.9
PEX28P38848 DFG16YOR030W 1860 nt3.21□□□□□ -1.9
PEX28P38848 NPR2YEL062W 1848 nt3.21□□□□□ -1.9
PEX28P38848 FLO5YHR211W 3228 nt3.21□□□□□ -1.9
PEX28P38848 MPH1YIR002C 2982 nt3.21□□□□□ -1.9
PEX28P38848 NAB3YPL190C 2409 nt3.2□□□□□ -1.9
PEX28P38848 PSF1YDR013W 627 nt3.2□□□□□ -1.9
PEX28P38848 YMR172C-AYMR172C-A 384 nt3.2□□□□□ -1.9
PEX28P38848 CYB5YNL111C 363 nt3.2□□□□□ -1.9
PEX28P38848 LSM7YNL147W 348 nt3.2□□□□□ -1.9
PEX28P38848 SGD1YLR336C 2700 nt3.2□□□□□ -1.9
PEX28P38848 YMR317WYMR317W 3423 nt3.19□□□□□ -1.9
PEX28P38848 YTA7YGR270W 4140 nt3.19□□□□□ -1.9
PEX28P38848 YDL025W-AYDL025W-A 105 nt3.19□□□□□ -1.9
PEX28P38848 ATP8Q0080 147 nt3.19□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 102 ms