Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ATP6V0CP27449 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP6V0CP27449 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ATP6V0CP27449 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP6V0CP27449 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP6V0CP27449 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.27■□□□□ 0.2
ATP6V0CP27449 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATP6V0CP27449 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP6V0CP27449 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATP6V0CP27449 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP6V0CP27449 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.27■□□□□ 0.2
ATP6V0CP27449 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP6V0CP27449 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATP6V0CP27449 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
ATP6V0CP27449 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP6V0CP27449 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ATP6V0CP27449 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATP6V0CP27449 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
ATP6V0CP27449 AC093484.2-201ENST00000580996 2166 ntBASIC16.27■□□□□ 0.19
ATP6V0CP27449 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATP6V0CP27449 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATP6V0CP27449 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATP6V0CP27449 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
ATP6V0CP27449 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATP6V0CP27449 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ATP6V0CP27449 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ATP6V0CP27449 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATP6V0CP27449 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATP6V0CP27449 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.27■□□□□ 0.19
ATP6V0CP27449 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.27■□□□□ 0.19
ATP6V0CP27449 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6V0CP27449 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6V0CP27449 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ATP6V0CP27449 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.26■□□□□ 0.19
ATP6V0CP27449 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6V0CP27449 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ATP6V0CP27449 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.26■□□□□ 0.19
ATP6V0CP27449 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6V0CP27449 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6V0CP27449 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6V0CP27449 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6V0CP27449 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
ATP6V0CP27449 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ATP6V0CP27449 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.26■□□□□ 0.19
ATP6V0CP27449 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6V0CP27449 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.26■□□□□ 0.19
ATP6V0CP27449 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ATP6V0CP27449 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
ATP6V0CP27449 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.26■□□□□ 0.19
ATP6V0CP27449 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.26■□□□□ 0.19
ATP6V0CP27449 AC138932.1-201ENST00000534164 6830 ntBASIC16.26■□□□□ 0.19
ATP6V0CP27449 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6V0CP27449 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6V0CP27449 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6V0CP27449 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6V0CP27449 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATP6V0CP27449 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.26■□□□□ 0.19
ATP6V0CP27449 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0CP27449 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0CP27449 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
ATP6V0CP27449 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0CP27449 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0CP27449 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.25■□□□□ 0.19
ATP6V0CP27449 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ATP6V0CP27449 MIR3181-201ENST00000578512 73 ntBASIC16.25■□□□□ 0.19
ATP6V0CP27449 HSD17B1P1-201ENST00000590052 955 ntBASIC16.25■□□□□ 0.19
ATP6V0CP27449 AC010997.5-201ENST00000609182 354 ntBASIC16.25■□□□□ 0.19
ATP6V0CP27449 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0CP27449 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0CP27449 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ATP6V0CP27449 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0CP27449 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0CP27449 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ATP6V0CP27449 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.25■□□□□ 0.19
ATP6V0CP27449 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATP6V0CP27449 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
ATP6V0CP27449 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0CP27449 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0CP27449 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0CP27449 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0CP27449 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0CP27449 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
ATP6V0CP27449 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ATP6V0CP27449 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0CP27449 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0CP27449 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0CP27449 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ATP6V0CP27449 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.24■□□□□ 0.19
ATP6V0CP27449 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0CP27449 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ATP6V0CP27449 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0CP27449 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0CP27449 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
ATP6V0CP27449 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0CP27449 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.24■□□□□ 0.19
ATP6V0CP27449 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0CP27449 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ATP6V0CP27449 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ATP6V0CP27449 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ATP6V0CP27449 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms