Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 YGL165CYGL165C 579 nt0.88□□□□□ -2.27
CDC39P25655 YJL133C-AYJL133C-A 225 nt0.88□□□□□ -2.27
CDC39P25655 YKL115CYKL115C 393 nt0.88□□□□□ -2.27
CDC39P25655 EGD1YPL037C 474 nt0.88□□□□□ -2.27
CDC39P25655 NSL1YPL233W 651 nt0.88□□□□□ -2.27
CDC39P25655 SPO24YPR036W-A 204 nt0.88□□□□□ -2.27
CDC39P25655 YPR146CYPR146C 330 nt0.88□□□□□ -2.27
CDC39P25655 snR24snR24 89 nt0.88□□□□□ -2.27
CDC39P25655 BEM2YER155C 6504 nt0.88□□□□□ -2.27
CDC39P25655 YIP1YGR172C 747 nt0.88□□□□□ -2.27
CDC39P25655 DIA1YMR316W 1011 nt0.88□□□□□ -2.27
CDC39P25655 NOP15YNL110C 663 nt0.88□□□□□ -2.27
CDC39P25655 MED8YBR193C 672 nt0.88□□□□□ -2.27
CDC39P25655 GRR1YJR090C 3456 nt0.87□□□□□ -2.27
CDC39P25655 SCC2YDR180W 4482 nt0.87□□□□□ -2.27
CDC39P25655 ASG1YIL130W 2895 nt0.87□□□□□ -2.27
CDC39P25655 EST2YLR318W 2655 nt0.87□□□□□ -2.27
CDC39P25655 YGR250CYGR250C 2346 nt0.87□□□□□ -2.27
CDC39P25655 YLR140WYLR140W 327 nt0.87□□□□□ -2.27
CDC39P25655 YBL083CYBL083C 426 nt0.87□□□□□ -2.27
CDC39P25655 YDL025W-AYDL025W-A 105 nt0.86□□□□□ -2.27
CDC39P25655 BET4YJL031C 984 nt0.86□□□□□ -2.27
CDC39P25655 VPS55YJR044C 423 nt0.86□□□□□ -2.27
CDC39P25655 NTC20YBR188C 423 nt0.86□□□□□ -2.27
CDC39P25655 ZRG8YER033C 3231 nt0.86□□□□□ -2.27
CDC39P25655 YIL080WYIL080W 4722 nt0.86□□□□□ -2.27
CDC39P25655 VPS63YLR261C 327 nt0.86□□□□□ -2.27
CDC39P25655 YBR224WYBR224W 516 nt0.86□□□□□ -2.27
CDC39P25655 MNL2YLR057W 2550 nt0.85□□□□□ -2.27
CDC39P25655 YJL032WYJL032W 315 nt0.85□□□□□ -2.27
CDC39P25655 YMR173W-AYMR173W-A 1185 nt0.85□□□□□ -2.27
CDC39P25655 YNL114CYNL114C 372 nt0.85□□□□□ -2.27
CDC39P25655 MAD1YGL086W 2250 nt0.85□□□□□ -2.27
CDC39P25655 RPL11BYGR085C 525 nt0.85□□□□□ -2.27
CDC39P25655 YHL002C-AYHL002C-A 489 nt0.85□□□□□ -2.27
CDC39P25655 IST3YIR005W 447 nt0.85□□□□□ -2.27
CDC39P25655 YJL086CYJL086C 369 nt0.85□□□□□ -2.27
CDC39P25655 YMR075C-AYMR075C-A 366 nt0.85□□□□□ -2.27
CDC39P25655 CYB5YNL111C 363 nt0.85□□□□□ -2.27
CDC39P25655 RPL11AYPR102C 525 nt0.85□□□□□ -2.27
CDC39P25655 ASM4YDL088C 1587 nt0.85□□□□□ -2.27
CDC39P25655 SEC5YDR166C 2916 nt0.84□□□□□ -2.27
CDC39P25655 NST1YNL091W 3723 nt0.84□□□□□ -2.27
CDC39P25655 YDL068WYDL068W 330 nt0.84□□□□□ -2.27
CDC39P25655 YDL211CYDL211C 1119 nt0.84□□□□□ -2.27
CDC39P25655 YGR242WYGR242W 309 nt0.84□□□□□ -2.27
CDC39P25655 RFA3YJL173C 369 nt0.84□□□□□ -2.27
CDC39P25655 YOR072W-AYOR072W-A 249 nt0.84□□□□□ -2.27
CDC39P25655 MGE1YOR232W 687 nt0.84□□□□□ -2.27
CDC39P25655 YPL034WYPL034W 498 nt0.84□□□□□ -2.27
CDC39P25655 SUS1YBR111W-A 291 nt0.84□□□□□ -2.27
CDC39P25655 MVP1YMR004W 1536 nt0.84□□□□□ -2.28
CDC39P25655 BNA7YDR428C 786 nt0.83□□□□□ -2.28
CDC39P25655 COX6YHR051W 447 nt0.83□□□□□ -2.28
CDC39P25655 YAL064WYAL064W 285 nt0.83□□□□□ -2.28
CDC39P25655 GPN3YLR243W 819 nt0.83□□□□□ -2.28
CDC39P25655 YOR032W-AYOR032W-A 201 nt0.83□□□□□ -2.28
CDC39P25655 YOR394C-AYOR394C-A 168 nt0.83□□□□□ -2.28
CDC39P25655 YLL054CYLL054C 2532 nt0.83□□□□□ -2.28
CDC39P25655 MSH5YDL154W 2706 nt0.83□□□□□ -2.28
CDC39P25655 FIG2YCR089W 4830 nt0.83□□□□□ -2.28
CDC39P25655 BRO1YPL084W 2535 nt0.83□□□□□ -2.28
CDC39P25655 DAS1YJL149W 1992 nt0.83□□□□□ -2.28
CDC39P25655 YFL012W-AYFL012W-A 375 nt0.83□□□□□ -2.28
CDC39P25655 APL1YJR005W 2103 nt0.83□□□□□ -2.28
CDC39P25655 HIT1YJR055W 495 nt0.83□□□□□ -2.28
CDC39P25655 FMP23YBR047W 528 nt0.83□□□□□ -2.28
CDC39P25655 SMY1YKL079W 1971 nt0.83□□□□□ -2.28
CDC39P25655 NTF2YER009W 378 nt0.82□□□□□ -2.28
CDC39P25655 YIL082WYIL082W 873 nt0.82□□□□□ -2.28
CDC39P25655 PEP8YJL053W 1140 nt0.82□□□□□ -2.28
CDC39P25655 HSK3YKL138C-A 210 nt0.82□□□□□ -2.28
CDC39P25655 GAL7YBR018C 1101 nt0.82□□□□□ -2.28
CDC39P25655 TFB6YOR352W 1032 nt0.82□□□□□ -2.28
CDC39P25655 YPR063CYPR063C 423 nt0.82□□□□□ -2.28
CDC39P25655 ESA1YOR244W 1338 nt0.82□□□□□ -2.28
CDC39P25655 RSM18YER050C 417 nt0.82□□□□□ -2.28
CDC39P25655 HOP2YGL033W 657 nt0.82□□□□□ -2.28
CDC39P25655 BFA1YJR053W 1725 nt0.82□□□□□ -2.28
CDC39P25655 SMD2YLR275W 333 nt0.82□□□□□ -2.28
CDC39P25655 YMR158C-AYMR158C-A 138 nt0.82□□□□□ -2.28
CDC39P25655 SWM2YNR004W 441 nt0.82□□□□□ -2.28
CDC39P25655 CSI2YOL007C 1026 nt0.82□□□□□ -2.28
CDC39P25655 OST5YGL226C-A 261 nt0.81□□□□□ -2.28
CDC39P25655 VOA1YGR106C 798 nt0.81□□□□□ -2.28
CDC39P25655 GIC1YHR061C 945 nt0.81□□□□□ -2.28
CDC39P25655 RPL34BYIL052C 366 nt0.81□□□□□ -2.28
CDC39P25655 RCN1YKL159C 636 nt0.81□□□□□ -2.28
CDC39P25655 RRT15YLR162W-A 189 nt0.81□□□□□ -2.28
CDC39P25655 YMR242W-AYMR242W-A 90 nt0.81□□□□□ -2.28
CDC39P25655 RIO2YNL207W 1278 nt0.81□□□□□ -2.28
CDC39P25655 NHP2YDL208W 471 nt0.8□□□□□ -2.28
CDC39P25655 YDR336WYDR336W 945 nt0.8□□□□□ -2.28
CDC39P25655 SDL1YIL167W 633 nt0.8□□□□□ -2.28
CDC39P25655 YML009C-AYML009C-A 327 nt0.8□□□□□ -2.28
CDC39P25655 LSM7YNL147W 348 nt0.8□□□□□ -2.28
CDC39P25655 snR44snR44 211 nt0.8□□□□□ -2.28
CDC39P25655 MON2YNL297C 4911 nt0.8□□□□□ -2.28
CDC39P25655 YBR012W-AYBR012W-A 1323 nt0.8□□□□□ -2.28
CDC39P25655 YOR142W-AYOR142W-A 1323 nt0.8□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 72.9 ms