Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC020907.5-201ENST00000624372 1936 ntBASIC19■□□□□ 0.63
CHMP24386 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP24386 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP24386 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19■□□□□ 0.63
CHMP24386 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHMP24386 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19■□□□□ 0.63
CHMP24386 AC073111.5-205ENST00000641717 521 ntBASIC19■□□□□ 0.63
CHMP24386 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19■□□□□ 0.63
CHMP24386 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19■□□□□ 0.63
CHMP24386 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CHMP24386 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHMP24386 KRT16P2-201ENST00000414673 1423 ntBASIC19■□□□□ 0.63
CHMP24386 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHMP24386 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP24386 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP24386 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.99■□□□□ 0.63
CHMP24386 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP24386 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP24386 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP24386 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP24386 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.99■□□□□ 0.63
CHMP24386 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.99■□□□□ 0.63
CHMP24386 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.99■□□□□ 0.63
CHMP24386 SLC7A5P2-201ENST00000553010 536 ntBASIC18.99■□□□□ 0.63
CHMP24386 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP24386 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP24386 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP24386 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP24386 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
CHMP24386 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP24386 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CHMP24386 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP24386 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP24386 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CHMP24386 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP24386 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.98■□□□□ 0.63
CHMP24386 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.98■□□□□ 0.63
CHMP24386 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP24386 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP24386 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.98■□□□□ 0.63
CHMP24386 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP24386 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP24386 CDCA4P2-201ENST00000441182 718 ntBASIC18.98■□□□□ 0.63
CHMP24386 AC026185.1-201ENST00000445748 174 ntBASIC18.98■□□□□ 0.63
CHMP24386 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CHMP24386 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.98■□□□□ 0.63
CHMP24386 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.98■□□□□ 0.63
CHMP24386 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CHMP24386 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.98■□□□□ 0.63
CHMP24386 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CHMP24386 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.98■□□□□ 0.63
CHMP24386 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP24386 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CHMP24386 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CHMP24386 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP24386 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.98■□□□□ 0.63
CHMP24386 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP24386 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP24386 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP24386 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP24386 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP24386 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP24386 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP24386 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CHMP24386 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP24386 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP24386 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.97■□□□□ 0.63
CHMP24386 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.97■□□□□ 0.63
CHMP24386 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP24386 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.97■□□□□ 0.63
CHMP24386 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.97■□□□□ 0.63
CHMP24386 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
CHMP24386 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.97■□□□□ 0.63
CHMP24386 RAP2CP1-201ENST00000605103 478 ntBASIC18.97■□□□□ 0.63
CHMP24386 AC231657.2-201ENST00000624556 255 ntBASIC18.97■□□□□ 0.63
CHMP24386 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.97■□□□□ 0.63
CHMP24386 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP24386 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CHMP24386 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
CHMP24386 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.97■□□□□ 0.63
CHMP24386 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CHMP24386 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.96■□□□□ 0.63
CHMP24386 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CHMP24386 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP24386 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CHMP24386 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CHMP24386 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.96■□□□□ 0.63
CHMP24386 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP24386 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP24386 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP24386 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CHMP24386 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.96■□□□□ 0.63
CHMP24386 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.96■□□□□ 0.63
CHMP24386 DUX4L16-201ENST00000555130 1264 ntBASIC18.96■□□□□ 0.63
CHMP24386 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CHMP24386 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.96■□□□□ 0.63
CHMP24386 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.96■□□□□ 0.63
CHMP24386 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.96■□□□□ 0.63
CHMP24386 AC010536.3-201ENST00000620306 533 ntBASIC18.96■□□□□ 0.63
CHMP24386 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms