Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
MMP11P24347 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP11P24347 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MMP11P24347 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
MMP11P24347 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP11P24347 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP11P24347 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MMP11P24347 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.32■□□□□ 0.68
MMP11P24347 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MMP11P24347 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MMP11P24347 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP11P24347 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
MMP11P24347 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.32■□□□□ 0.68
MMP11P24347 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
MMP11P24347 AL589743.5-201ENST00000616611 1050 ntBASIC19.32■□□□□ 0.68
MMP11P24347 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.32■□□□□ 0.68
MMP11P24347 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
MMP11P24347 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.32■□□□□ 0.68
MMP11P24347 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
MMP11P24347 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP11P24347 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP11P24347 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MMP11P24347 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.32■□□□□ 0.68
MMP11P24347 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP11P24347 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP11P24347 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP11P24347 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.31■□□□□ 0.68
MMP11P24347 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.31■□□□□ 0.68
MMP11P24347 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
MMP11P24347 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
MMP11P24347 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP11P24347 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP11P24347 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP11P24347 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP11P24347 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP11P24347 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
MMP11P24347 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.31■□□□□ 0.68
MMP11P24347 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.31■□□□□ 0.68
MMP11P24347 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MMP11P24347 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.31■□□□□ 0.68
MMP11P24347 AC116050.2-201ENST00000612102 1779 ntBASIC19.31■□□□□ 0.68
MMP11P24347 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MMP11P24347 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP11P24347 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MMP11P24347 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP11P24347 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.3■□□□□ 0.68
MMP11P24347 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MMP11P24347 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MMP11P24347 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.3■□□□□ 0.68
MMP11P24347 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP11P24347 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.3■□□□□ 0.68
MMP11P24347 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP11P24347 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP11P24347 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MMP11P24347 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.3■□□□□ 0.68
MMP11P24347 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.3■□□□□ 0.68
MMP11P24347 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
MMP11P24347 ITM2C-210ENST00000620962 501 ntBASIC19.3■□□□□ 0.68
MMP11P24347 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP11P24347 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP11P24347 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MMP11P24347 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP11P24347 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MMP11P24347 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.3■□□□□ 0.68
MMP11P24347 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
MMP11P24347 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MMP11P24347 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.3■□□□□ 0.68
MMP11P24347 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MMP11P24347 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MMP11P24347 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MMP11P24347 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP11P24347 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP11P24347 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP11P24347 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP11P24347 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP11P24347 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP11P24347 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MMP11P24347 KRT18P68-201ENST00000392293 1000 ntBASIC19.29■□□□□ 0.68
MMP11P24347 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.29■□□□□ 0.68
MMP11P24347 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.29■□□□□ 0.68
MMP11P24347 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP11P24347 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
MMP11P24347 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.29■□□□□ 0.68
MMP11P24347 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MMP11P24347 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MMP11P24347 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
MMP11P24347 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
MMP11P24347 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.29■□□□□ 0.68
MMP11P24347 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MMP11P24347 LINC01006-201ENST00000333319 2292 ntBASIC19.28■□□□□ 0.68
MMP11P24347 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP11P24347 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
MMP11P24347 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP11P24347 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP11P24347 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP11P24347 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP11P24347 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP11P24347 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MMP11P24347 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MMP11P24347 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms