Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
XPAP23025 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
XPAP23025 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
XPAP23025 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
XPAP23025 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
XPAP23025 RNA5SP413-201ENST00000516373 109 ntBASIC20.54■□□□□ 0.88
XPAP23025 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
XPAP23025 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
XPAP23025 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.54■□□□□ 0.88
XPAP23025 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.54■□□□□ 0.88
XPAP23025 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
XPAP23025 AC026310.3-201ENST00000625186 2373 ntBASIC20.54■□□□□ 0.88
XPAP23025 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
XPAP23025 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
XPAP23025 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
XPAP23025 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
XPAP23025 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.54■□□□□ 0.88
XPAP23025 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
XPAP23025 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.54■□□□□ 0.88
XPAP23025 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
XPAP23025 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
XPAP23025 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
XPAP23025 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
XPAP23025 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
XPAP23025 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.53■□□□□ 0.88
XPAP23025 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.53■□□□□ 0.88
XPAP23025 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
XPAP23025 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
XPAP23025 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
XPAP23025 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.53■□□□□ 0.88
XPAP23025 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.53■□□□□ 0.88
XPAP23025 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
XPAP23025 AL356652.1-201ENST00000615962 565 ntBASIC20.53■□□□□ 0.88
XPAP23025 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
XPAP23025 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.53■□□□□ 0.88
XPAP23025 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
XPAP23025 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.53■□□□□ 0.88
XPAP23025 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
XPAP23025 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
XPAP23025 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
XPAP23025 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
XPAP23025 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.53■□□□□ 0.88
XPAP23025 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
XPAP23025 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
XPAP23025 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
XPAP23025 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
XPAP23025 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
XPAP23025 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
XPAP23025 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.53■□□□□ 0.88
XPAP23025 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
XPAP23025 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
XPAP23025 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
XPAP23025 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.52■□□□□ 0.88
XPAP23025 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
XPAP23025 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.52■□□□□ 0.88
XPAP23025 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.52■□□□□ 0.88
XPAP23025 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.52■□□□□ 0.88
XPAP23025 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
XPAP23025 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
XPAP23025 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
XPAP23025 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.52■□□□□ 0.88
XPAP23025 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
XPAP23025 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
XPAP23025 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
XPAP23025 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
XPAP23025 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
XPAP23025 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
XPAP23025 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
XPAP23025 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
XPAP23025 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
XPAP23025 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
XPAP23025 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.51■□□□□ 0.87
XPAP23025 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.51■□□□□ 0.87
XPAP23025 MYC-209ENST00000641252 345 ntBASIC20.51■□□□□ 0.87
XPAP23025 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
XPAP23025 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
XPAP23025 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
XPAP23025 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
XPAP23025 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
XPAP23025 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.5■□□□□ 0.87
XPAP23025 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
XPAP23025 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
XPAP23025 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.5■□□□□ 0.87
XPAP23025 AC027702.1-201ENST00000563810 1770 ntBASIC20.5■□□□□ 0.87
XPAP23025 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
XPAP23025 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.5■□□□□ 0.87
XPAP23025 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.5■□□□□ 0.87
XPAP23025 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.5■□□□□ 0.87
XPAP23025 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.5■□□□□ 0.87
XPAP23025 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.5■□□□□ 0.87
XPAP23025 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.5■□□□□ 0.87
XPAP23025 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
XPAP23025 AC083880.1-201ENST00000608266 535 ntBASIC20.5■□□□□ 0.87
XPAP23025 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.5■□□□□ 0.87
XPAP23025 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
XPAP23025 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
XPAP23025 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
XPAP23025 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
XPAP23025 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
XPAP23025 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms