Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.98■□□□□ 0.47
MSR1P21757 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
MSR1P21757 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MSR1P21757 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MSR1P21757 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MSR1P21757 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.98■□□□□ 0.47
MSR1P21757 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
MSR1P21757 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
MSR1P21757 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MSR1P21757 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
MSR1P21757 AC092667.1-201ENST00000434301 2586 ntBASIC17.98■□□□□ 0.47
MSR1P21757 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MSR1P21757 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.98■□□□□ 0.47
MSR1P21757 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MSR1P21757 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
MSR1P21757 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.98■□□□□ 0.47
MSR1P21757 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSR1P21757 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSR1P21757 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSR1P21757 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.97■□□□□ 0.47
MSR1P21757 AC092720.2-201ENST00000602388 1665 ntBASIC17.97■□□□□ 0.47
MSR1P21757 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.97■□□□□ 0.47
MSR1P21757 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MSR1P21757 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSR1P21757 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSR1P21757 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSR1P21757 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSR1P21757 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSR1P21757 MIR935-201ENST00000401179 91 ntBASIC17.97■□□□□ 0.47
MSR1P21757 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
MSR1P21757 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MSR1P21757 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.97■□□□□ 0.47
MSR1P21757 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.97■□□□□ 0.47
MSR1P21757 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.97■□□□□ 0.47
MSR1P21757 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.96■□□□□ 0.47
MSR1P21757 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MSR1P21757 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MSR1P21757 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MSR1P21757 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.96■□□□□ 0.47
MSR1P21757 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MSR1P21757 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MSR1P21757 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
MSR1P21757 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
MSR1P21757 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MSR1P21757 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.96■□□□□ 0.47
MSR1P21757 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.96■□□□□ 0.47
MSR1P21757 DUX4L16-201ENST00000555130 1264 ntBASIC17.96■□□□□ 0.47
MSR1P21757 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.96■□□□□ 0.47
MSR1P21757 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MSR1P21757 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.96■□□□□ 0.47
MSR1P21757 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MSR1P21757 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
MSR1P21757 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
MSR1P21757 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
MSR1P21757 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.96■□□□□ 0.46
MSR1P21757 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.96■□□□□ 0.46
MSR1P21757 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
MSR1P21757 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MSR1P21757 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MSR1P21757 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MSR1P21757 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MSR1P21757 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MSR1P21757 PGM5P4-201ENST00000421970 445 ntBASIC17.95■□□□□ 0.46
MSR1P21757 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.95■□□□□ 0.46
MSR1P21757 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.95■□□□□ 0.46
MSR1P21757 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.95■□□□□ 0.46
MSR1P21757 AC022517.1-201ENST00000592429 346 ntBASIC17.95■□□□□ 0.46
MSR1P21757 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
MSR1P21757 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MSR1P21757 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MSR1P21757 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MSR1P21757 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
MSR1P21757 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.95■□□□□ 0.46
MSR1P21757 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.95■□□□□ 0.46
MSR1P21757 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
MSR1P21757 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
MSR1P21757 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MSR1P21757 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MSR1P21757 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MSR1P21757 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
MSR1P21757 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.95■□□□□ 0.46
MSR1P21757 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MSR1P21757 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.94■□□□□ 0.46
MSR1P21757 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
MSR1P21757 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MSR1P21757 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
MSR1P21757 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MSR1P21757 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MSR1P21757 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
MSR1P21757 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MSR1P21757 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.94■□□□□ 0.46
MSR1P21757 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
MSR1P21757 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MSR1P21757 CNN2P6-201ENST00000439038 900 ntBASIC17.94■□□□□ 0.46
MSR1P21757 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.94■□□□□ 0.46
MSR1P21757 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.94■□□□□ 0.46
MSR1P21757 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
MSR1P21757 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MSR1P21757 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MSR1P21757 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms