Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN3P20807 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN3P20807 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN3P20807 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.56■□□□□ 0.72
CAPN3P20807 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.56■□□□□ 0.72
CAPN3P20807 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN3P20807 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN3P20807 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN3P20807 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN3P20807 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.56■□□□□ 0.72
CAPN3P20807 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN3P20807 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN3P20807 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.56■□□□□ 0.72
CAPN3P20807 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN3P20807 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CAPN3P20807 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.56■□□□□ 0.72
CAPN3P20807 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN3P20807 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN3P20807 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN3P20807 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN3P20807 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN3P20807 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.55■□□□□ 0.72
CAPN3P20807 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN3P20807 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
CAPN3P20807 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN3P20807 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN3P20807 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN3P20807 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.55■□□□□ 0.72
CAPN3P20807 AL354811.1-201ENST00000610286 706 ntBASIC19.55■□□□□ 0.72
CAPN3P20807 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN3P20807 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN3P20807 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.55■□□□□ 0.72
CAPN3P20807 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN3P20807 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN3P20807 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.55■□□□□ 0.72
CAPN3P20807 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CAPN3P20807 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CAPN3P20807 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN3P20807 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CAPN3P20807 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.54■□□□□ 0.72
CAPN3P20807 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.54■□□□□ 0.72
CAPN3P20807 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.54■□□□□ 0.72
CAPN3P20807 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN3P20807 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN3P20807 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.54■□□□□ 0.72
CAPN3P20807 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.54■□□□□ 0.72
CAPN3P20807 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.54■□□□□ 0.72
CAPN3P20807 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.54■□□□□ 0.72
CAPN3P20807 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CAPN3P20807 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN3P20807 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN3P20807 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
CAPN3P20807 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CAPN3P20807 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.53■□□□□ 0.72
CAPN3P20807 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.53■□□□□ 0.72
CAPN3P20807 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
CAPN3P20807 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CAPN3P20807 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN3P20807 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN3P20807 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN3P20807 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.53■□□□□ 0.72
CAPN3P20807 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN3P20807 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN3P20807 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN3P20807 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN3P20807 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.53■□□□□ 0.72
CAPN3P20807 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN3P20807 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.53■□□□□ 0.72
CAPN3P20807 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.53■□□□□ 0.72
CAPN3P20807 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.53■□□□□ 0.72
CAPN3P20807 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.53■□□□□ 0.72
CAPN3P20807 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CAPN3P20807 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN3P20807 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.53■□□□□ 0.72
CAPN3P20807 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN3P20807 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.53■□□□□ 0.72
CAPN3P20807 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN3P20807 AC125437.2-201ENST00000625180 2167 ntBASIC19.53■□□□□ 0.72
CAPN3P20807 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CAPN3P20807 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN3P20807 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN3P20807 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN3P20807 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN3P20807 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN3P20807 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN3P20807 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.52■□□□□ 0.72
CAPN3P20807 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.52■□□□□ 0.72
CAPN3P20807 TPRG1LP1-201ENST00000598702 760 ntBASIC19.52■□□□□ 0.72
CAPN3P20807 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.52■□□□□ 0.72
CAPN3P20807 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN3P20807 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.52■□□□□ 0.72
CAPN3P20807 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
CAPN3P20807 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CAPN3P20807 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN3P20807 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CAPN3P20807 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CAPN3P20807 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CAPN3P20807 AC087289.5-201ENST00000586076 3175 ntBASIC19.52■□□□□ 0.71
CAPN3P20807 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.52■□□□□ 0.71
CAPN3P20807 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms