Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 IPT1YDR072C 1584 nt2.64□□□□□ -1.99
CDC43P18898 FRT2YAL028W 1587 nt2.64□□□□□ -1.99
CDC43P18898 NOG1YPL093W 1944 nt2.64□□□□□ -1.99
CDC43P18898 NCL1YBL024W 2055 nt2.64□□□□□ -1.99
CDC43P18898 ROM1YGR070W 3468 nt2.63□□□□□ -1.99
CDC43P18898 REG1YDR028C 3045 nt2.63□□□□□ -1.99
CDC43P18898 YGL052WYGL052W 306 nt2.63□□□□□ -1.99
CDC43P18898 tL(UAG)JtL(UAG)J 82 nt2.63□□□□□ -1.99
CDC43P18898 tL(UAG)L1tL(UAG)L1 82 nt2.63□□□□□ -1.99
CDC43P18898 tL(UAG)L2tL(UAG)L2 82 nt2.63□□□□□ -1.99
CDC43P18898 YJL135WYJL135W 318 nt2.63□□□□□ -1.99
CDC43P18898 RRM3YHR031C 2172 nt2.63□□□□□ -1.99
CDC43P18898 CHO2YGR157W 2610 nt2.62□□□□□ -1.99
CDC43P18898 GCD6YDR211W 2139 nt2.62□□□□□ -1.99
CDC43P18898 DIA2YOR080W 2199 nt2.62□□□□□ -1.99
CDC43P18898 AUS1YOR011W 4185 nt2.62□□□□□ -1.99
CDC43P18898 snR60snR60 104 nt2.62□□□□□ -1.99
CDC43P18898 YDL242WYDL242W 354 nt2.62□□□□□ -1.99
CDC43P18898 DYN2YDR424C 279 nt2.62□□□□□ -1.99
CDC43P18898 YGL069CYGL069C 465 nt2.62□□□□□ -1.99
CDC43P18898 RAM2YKL019W 951 nt2.62□□□□□ -1.99
CDC43P18898 YLR342W-AYLR342W-A 174 nt2.62□□□□□ -1.99
CDC43P18898 CYB5YNL111C 363 nt2.62□□□□□ -1.99
CDC43P18898 YNL205CYNL205C 423 nt2.62□□□□□ -1.99
CDC43P18898 LEU3YLR451W 2661 nt2.62□□□□□ -1.99
CDC43P18898 MAK21YDR060W 3078 nt2.62□□□□□ -1.99
CDC43P18898 SPT10YJL127C 1923 nt2.62□□□□□ -1.99
CDC43P18898 RIM20YOR275C 1986 nt2.61□□□□□ -1.99
CDC43P18898 CSR2YPR030W 3366 nt2.61□□□□□ -1.99
CDC43P18898 AI5_ALPHAQ0070 1893 nt2.61□□□□□ -1.99
CDC43P18898 SEC15YGL233W 2733 nt2.61□□□□□ -1.99
CDC43P18898 NPC2YDL046W 522 nt2.61□□□□□ -1.99
CDC43P18898 YHR032C-AYHR032C-A 120 nt2.61□□□□□ -1.99
CDC43P18898 YLR120W-AYLR120W-A 102 nt2.61□□□□□ -1.99
CDC43P18898 BUD4YJR092W 4344 nt2.61□□□□□ -1.99
CDC43P18898 MSH2YOL090W 2895 nt2.61□□□□□ -1.99
CDC43P18898 YAT2YER024W 2772 nt2.61□□□□□ -1.99
CDC43P18898 ENA5YDR038C 3276 nt2.6□□□□□ -1.99
CDC43P18898 TCB3YML072C 4638 nt2.6□□□□□ -1.99
CDC43P18898 YIL059CYIL059C 366 nt2.6□□□□□ -1.99
CDC43P18898 YLR140WYLR140W 327 nt2.6□□□□□ -1.99
CDC43P18898 RPL38YLR325C 237 nt2.6□□□□□ -1.99
CDC43P18898 YMR321CYMR321C 318 nt2.6□□□□□ -1.99
CDC43P18898 TMA108YIL137C 2841 nt2.6□□□□□ -1.99
CDC43P18898 RPA135YPR010C 3612 nt2.6□□□□□ -1.99
CDC43P18898 MSR1YHR091C 1932 nt2.6□□□□□ -1.99
CDC43P18898 BFA1YJR053W 1725 nt2.59□□□□□ -1.99
CDC43P18898 BOI1YBL085W 2943 nt2.59□□□□□ -1.99
CDC43P18898 YSP2YDR326C 4317 nt2.59□□□□□ -1.99
CDC43P18898 KAR3YPR141C 2190 nt2.59□□□□□ -1.99
CDC43P18898 GIN4YDR507C 3429 nt2.59□□□□□ -1.99
CDC43P18898 RPS8AYBL072C 603 nt2.59□□□□□ -1.99
CDC43P18898 LSM7YNL147W 348 nt2.59□□□□□ -1.99
CDC43P18898 RTC6YPL183W-A 282 nt2.59□□□□□ -1.99
CDC43P18898 PSF1YDR013W 627 nt2.58□□□□□ -2
CDC43P18898 YGL024WYGL024W 336 nt2.58□□□□□ -2
CDC43P18898 YLR154W-EYLR154W-E 204 nt2.58□□□□□ -2
CDC43P18898 YMR194C-AYMR194C-A 225 nt2.58□□□□□ -2
CDC43P18898 GOT1YMR292W 417 nt2.58□□□□□ -2
CDC43P18898 BCH1YMR237W 2175 nt2.58□□□□□ -2
CDC43P18898 RLI1YDR091C 1827 nt2.58□□□□□ -2
CDC43P18898 RLF2YPR018W 1821 nt2.58□□□□□ -2
CDC43P18898 VIK1YPL253C 1944 nt2.58□□□□□ -2
CDC43P18898 YNR065CYNR065C 3351 nt2.58□□□□□ -2
CDC43P18898 SPB1YCL054W 2526 nt2.58□□□□□ -2
CDC43P18898 YLR255CYLR255C 354 nt2.57□□□□□ -2
CDC43P18898 YNL097C-BYNL097C-B 123 nt2.57□□□□□ -2
CDC43P18898 HDA3YPR179C 1968 nt2.57□□□□□ -2
CDC43P18898 MET5YJR137C 4329 nt2.56□□□□□ -2
CDC43P18898 TFC1YBR123C 1950 nt2.56□□□□□ -2
CDC43P18898 MPH1YIR002C 2982 nt2.56□□□□□ -2
CDC43P18898 RBK1YCR036W 1002 nt2.56□□□□□ -2
CDC43P18898 PRE4YFR050C 801 nt2.56□□□□□ -2
CDC43P18898 CDC20YGL116W 1833 nt2.56□□□□□ -2
CDC43P18898 JEN1YKL217W 1851 nt2.56□□□□□ -2
CDC43P18898 YGR250CYGR250C 2346 nt2.55□□□□□ -2
CDC43P18898 SLH1YGR271W 5904 nt2.55□□□□□ -2
CDC43P18898 YIL020C-AYIL020C-A 339 nt2.55□□□□□ -2
CDC43P18898 INA22YIR024C 651 nt2.55□□□□□ -2
CDC43P18898 VPS55YJR044C 423 nt2.55□□□□□ -2
CDC43P18898 YKL162C-AYKL162C-A 153 nt2.55□□□□□ -2
CDC43P18898 PCC1YKR095W-A 267 nt2.55□□□□□ -2
CDC43P18898 YLR154C-HYLR154C-H 132 nt2.55□□□□□ -2
CDC43P18898 YLR156C-AYLR156C-A 132 nt2.55□□□□□ -2
CDC43P18898 YLR157C-CYLR157C-C 132 nt2.55□□□□□ -2
CDC43P18898 YLR159C-AYLR159C-A 132 nt2.55□□□□□ -2
CDC43P18898 YOL057WYOL057W 2136 nt2.55□□□□□ -2
CDC43P18898 RIF1YBR275C 5751 nt2.55□□□□□ -2
CDC43P18898 TOM1YDR457W 9807 nt2.55□□□□□ -2
CDC43P18898 PUF4YGL014W 2667 nt2.55□□□□□ -2
CDC43P18898 MET10YFR030W 3108 nt2.54□□□□□ -2
CDC43P18898 snR85snR85 171 nt2.54□□□□□ -2
CDC43P18898 GRX8YLR364W 330 nt2.54□□□□□ -2
CDC43P18898 NUT2YPR168W 474 nt2.54□□□□□ -2
CDC43P18898 MYO5YMR109W 3660 nt2.54□□□□□ -2
CDC43P18898 YDR034C-DYDR034C-D 5313 nt2.54□□□□□ -2
CDC43P18898 SPO14YKR031C 5052 nt2.54□□□□□ -2
CDC43P18898 YBT1YLL048C 4986 nt2.54□□□□□ -2
CDC43P18898 SSS1YDR086C 243 nt2.53□□□□□ -2
CDC43P18898 YNL028WYNL028W 318 nt2.53□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 55 ms