Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDH1P12830 AC007322.1-201ENST00000426983 750 ntBASIC19.83■□□□□ 0.77
CDH1P12830 CDV3P1-201ENST00000471403 739 ntBASIC19.83■□□□□ 0.77
CDH1P12830 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.83■□□□□ 0.77
CDH1P12830 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.83■□□□□ 0.77
CDH1P12830 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDH1P12830 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDH1P12830 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDH1P12830 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDH1P12830 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDH1P12830 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH1P12830 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH1P12830 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH1P12830 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.82■□□□□ 0.76
CDH1P12830 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH1P12830 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH1P12830 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH1P12830 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH1P12830 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CDH1P12830 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDH1P12830 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH1P12830 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CDH1P12830 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.82■□□□□ 0.76
CDH1P12830 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDH1P12830 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH1P12830 AC231657.2-201ENST00000624556 255 ntBASIC19.82■□□□□ 0.76
CDH1P12830 AC073111.5-205ENST00000641717 521 ntBASIC19.82■□□□□ 0.76
CDH1P12830 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH1P12830 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH1P12830 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDH1P12830 AP005212.1-201ENST00000581547 1997 ntBASIC19.82■□□□□ 0.76
CDH1P12830 AC068338.2-201ENST00000563278 1430 ntBASIC19.82■□□□□ 0.76
CDH1P12830 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH1P12830 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH1P12830 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
CDH1P12830 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.81■□□□□ 0.76
CDH1P12830 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH1P12830 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH1P12830 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDH1P12830 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.81■□□□□ 0.76
CDH1P12830 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH1P12830 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.81■□□□□ 0.76
CDH1P12830 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CDH1P12830 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.81■□□□□ 0.76
CDH1P12830 AC016405.3-201ENST00000607710 860 ntBASIC19.81■□□□□ 0.76
CDH1P12830 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDH1P12830 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH1P12830 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH1P12830 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CDH1P12830 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.81■□□□□ 0.76
CDH1P12830 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDH1P12830 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH1P12830 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH1P12830 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CDH1P12830 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH1P12830 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH1P12830 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH1P12830 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.8■□□□□ 0.76
CDH1P12830 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH1P12830 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH1P12830 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH1P12830 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CDH1P12830 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH1P12830 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH1P12830 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.8■□□□□ 0.76
CDH1P12830 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
CDH1P12830 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
CDH1P12830 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH1P12830 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH1P12830 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH1P12830 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
CDH1P12830 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH1P12830 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH1P12830 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH1P12830 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.79■□□□□ 0.76
CDH1P12830 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH1P12830 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH1P12830 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.79■□□□□ 0.76
CDH1P12830 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CDH1P12830 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.79■□□□□ 0.76
CDH1P12830 CDCA4P2-201ENST00000441182 718 ntBASIC19.79■□□□□ 0.76
CDH1P12830 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.79■□□□□ 0.76
CDH1P12830 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH1P12830 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.79■□□□□ 0.76
CDH1P12830 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.79■□□□□ 0.76
CDH1P12830 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDH1P12830 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CDH1P12830 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH1P12830 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH1P12830 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH1P12830 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDH1P12830 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.79■□□□□ 0.76
CDH1P12830 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDH1P12830 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH1P12830 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH1P12830 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.78■□□□□ 0.76
CDH1P12830 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH1P12830 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH1P12830 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH1P12830 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms