Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AL117328.2-201ENST00000624617 1940 ntBASIC22.69■■□□□ 1.22
MMP3P08254 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
MMP3P08254 AC027702.1-201ENST00000563810 1770 ntBASIC22.68■■□□□ 1.22
MMP3P08254 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
MMP3P08254 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
MMP3P08254 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
MMP3P08254 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.68■■□□□ 1.22
MMP3P08254 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.68■■□□□ 1.22
MMP3P08254 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
MMP3P08254 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
MMP3P08254 RPS2P55-201ENST00000397318 883 ntBASIC22.68■■□□□ 1.22
MMP3P08254 KRASP1-201ENST00000407852 552 ntBASIC22.68■■□□□ 1.22
MMP3P08254 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.68■■□□□ 1.22
MMP3P08254 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.68■■□□□ 1.22
MMP3P08254 AC107956.1-201ENST00000494359 873 ntBASIC22.68■■□□□ 1.22
MMP3P08254 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.68■■□□□ 1.22
MMP3P08254 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.68■■□□□ 1.22
MMP3P08254 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.68■■□□□ 1.22
MMP3P08254 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
MMP3P08254 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
MMP3P08254 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MMP3P08254 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
MMP3P08254 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
MMP3P08254 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
MMP3P08254 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
MMP3P08254 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
MMP3P08254 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.67■■□□□ 1.22
MMP3P08254 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.67■■□□□ 1.22
MMP3P08254 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.67■■□□□ 1.22
MMP3P08254 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.67■■□□□ 1.22
MMP3P08254 AC110285.5-201ENST00000611501 352 ntBASIC22.67■■□□□ 1.22
MMP3P08254 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
MMP3P08254 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
MMP3P08254 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.66■■□□□ 1.22
MMP3P08254 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
MMP3P08254 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.66■■□□□ 1.22
MMP3P08254 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
MMP3P08254 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.66■■□□□ 1.22
MMP3P08254 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
MMP3P08254 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
MMP3P08254 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
MMP3P08254 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.66■■□□□ 1.22
MMP3P08254 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.66■■□□□ 1.22
MMP3P08254 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
MMP3P08254 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.66■■□□□ 1.22
MMP3P08254 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MMP3P08254 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
MMP3P08254 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
MMP3P08254 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
MMP3P08254 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
MMP3P08254 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MMP3P08254 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.65■■□□□ 1.22
MMP3P08254 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
MMP3P08254 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
MMP3P08254 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
MMP3P08254 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.65■■□□□ 1.22
MMP3P08254 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.65■■□□□ 1.22
MMP3P08254 AC073912.3-201ENST00000624414 853 ntBASIC22.65■■□□□ 1.22
MMP3P08254 MIR2861-201ENST00000636310 90 ntBASIC22.65■■□□□ 1.22
MMP3P08254 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.65■■□□□ 1.22
MMP3P08254 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.65■■□□□ 1.22
MMP3P08254 FBXW4P1-201ENST00000426721 2239 ntBASIC22.65■■□□□ 1.22
MMP3P08254 KRT8P36-201ENST00000489121 1440 ntBASIC22.65■■□□□ 1.22
MMP3P08254 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
MMP3P08254 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.64■■□□□ 1.22
MMP3P08254 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.64■■□□□ 1.22
MMP3P08254 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
MMP3P08254 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
MMP3P08254 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
MMP3P08254 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
MMP3P08254 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.64■■□□□ 1.21
MMP3P08254 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.64■■□□□ 1.21
MMP3P08254 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.64■■□□□ 1.21
MMP3P08254 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.64■■□□□ 1.21
MMP3P08254 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MMP3P08254 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MMP3P08254 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.64■■□□□ 1.21
MMP3P08254 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
MMP3P08254 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
MMP3P08254 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
MMP3P08254 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.64■■□□□ 1.21
MMP3P08254 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
MMP3P08254 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
MMP3P08254 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MMP3P08254 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MMP3P08254 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
MMP3P08254 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
MMP3P08254 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
MMP3P08254 TSPY7P-201ENST00000431358 1114 ntBASIC22.63■■□□□ 1.21
MMP3P08254 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
MMP3P08254 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.63■■□□□ 1.21
MMP3P08254 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.63■■□□□ 1.21
MMP3P08254 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.63■■□□□ 1.21
MMP3P08254 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.63■■□□□ 1.21
MMP3P08254 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MMP3P08254 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
MMP3P08254 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
MMP3P08254 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.63■■□□□ 1.21
MMP3P08254 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
MMP3P08254 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms