Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 REXO1L10P-201ENST00000615707 1290 ntBASIC27.11■■□□□ 1.93
COL5A2P05997 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
COL5A2P05997 AL049597.2-201ENST00000565575 961 ntBASIC27.1■■□□□ 1.93
COL5A2P05997 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC27.1■■□□□ 1.93
COL5A2P05997 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
COL5A2P05997 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC27.1■■□□□ 1.93
COL5A2P05997 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC27.09■■□□□ 1.93
COL5A2P05997 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
COL5A2P05997 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC27.09■■□□□ 1.93
COL5A2P05997 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
COL5A2P05997 AC113347.1-201ENST00000413321 391 ntBASIC27.09■■□□□ 1.93
COL5A2P05997 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC27.09■■□□□ 1.93
COL5A2P05997 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC27.09■■□□□ 1.93
COL5A2P05997 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
COL5A2P05997 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
COL5A2P05997 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
COL5A2P05997 NBPF21P-201ENST00000425093 1451 ntBASIC27.09■■□□□ 1.93
COL5A2P05997 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
COL5A2P05997 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
COL5A2P05997 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC27.09■■□□□ 1.93
COL5A2P05997 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
COL5A2P05997 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
COL5A2P05997 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC27.08■■□□□ 1.93
COL5A2P05997 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
COL5A2P05997 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC27.08■■□□□ 1.93
COL5A2P05997 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC27.08■■□□□ 1.93
COL5A2P05997 AP000525.1-201ENST00000608286 694 ntBASIC27.08■■□□□ 1.93
COL5A2P05997 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
COL5A2P05997 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
COL5A2P05997 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
COL5A2P05997 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
COL5A2P05997 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
COL5A2P05997 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC27.07■■□□□ 1.92
COL5A2P05997 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC27.07■■□□□ 1.92
COL5A2P05997 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC27.07■■□□□ 1.92
COL5A2P05997 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
COL5A2P05997 RBM42-202ENST00000586618 771 ntTSL 3 BASIC27.07■■□□□ 1.92
COL5A2P05997 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
COL5A2P05997 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC27.07■■□□□ 1.92
COL5A2P05997 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
COL5A2P05997 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
COL5A2P05997 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
COL5A2P05997 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
COL5A2P05997 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC27.07■■□□□ 1.92
COL5A2P05997 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC27.07■■□□□ 1.92
COL5A2P05997 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC27.07■■□□□ 1.92
COL5A2P05997 AC005521.1-201ENST00000393351 872 ntBASIC27.06■■□□□ 1.92
COL5A2P05997 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC27.06■■□□□ 1.92
COL5A2P05997 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC27.06■■□□□ 1.92
COL5A2P05997 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC27.06■■□□□ 1.92
COL5A2P05997 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
COL5A2P05997 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
COL5A2P05997 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
COL5A2P05997 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC27.06■■□□□ 1.92
COL5A2P05997 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
COL5A2P05997 ARMC10P1-201ENST00000313754 855 ntBASIC27.06■■□□□ 1.92
COL5A2P05997 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
COL5A2P05997 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
COL5A2P05997 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
COL5A2P05997 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
COL5A2P05997 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC27.05■■□□□ 1.92
COL5A2P05997 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC27.05■■□□□ 1.92
COL5A2P05997 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
COL5A2P05997 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC27.05■■□□□ 1.92
COL5A2P05997 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC27.05■■□□□ 1.92
COL5A2P05997 KRT18P57-201ENST00000443599 1254 ntBASIC27.05■■□□□ 1.92
COL5A2P05997 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC27.05■■□□□ 1.92
COL5A2P05997 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC27.05■■□□□ 1.92
COL5A2P05997 AC073195.1-201ENST00000607241 877 ntBASIC27.05■■□□□ 1.92
COL5A2P05997 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL5A2P05997 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC27.05■■□□□ 1.92
COL5A2P05997 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL5A2P05997 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL5A2P05997 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL5A2P05997 MFF-203ENST00000349901 1716 ntTSL 2 BASIC27.04■■□□□ 1.92
COL5A2P05997 TREX2-204ENST00000370212 861 ntTSL 5 BASIC27.04■■□□□ 1.92
COL5A2P05997 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
COL5A2P05997 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
COL5A2P05997 F2R-202ENST00000505600 442 ntTSL 2 BASIC27.04■■□□□ 1.92
COL5A2P05997 AC023632.3-201ENST00000521633 145 ntBASIC27.04■■□□□ 1.92
COL5A2P05997 DUT-205ENST00000558813 769 ntTSL 2 BASIC27.04■■□□□ 1.92
COL5A2P05997 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC27.04■■□□□ 1.92
COL5A2P05997 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
COL5A2P05997 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC27.04■■□□□ 1.92
COL5A2P05997 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC27.04■■□□□ 1.92
COL5A2P05997 AC005363.2-201ENST00000618631 242 ntBASIC27.04■■□□□ 1.92
COL5A2P05997 AL121906.2-201ENST00000621597 723 ntBASIC27.04■■□□□ 1.92
COL5A2P05997 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC27.04■■□□□ 1.92
COL5A2P05997 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC27.04■■□□□ 1.92
COL5A2P05997 AL590326.2-201ENST00000625139 305 ntBASIC27.04■■□□□ 1.92
COL5A2P05997 GLDC-219ENST00000640208 420 ntTSL 2 BASIC27.04■■□□□ 1.92
COL5A2P05997 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
COL5A2P05997 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL5A2P05997 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
COL5A2P05997 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
COL5A2P05997 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL5A2P05997 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL5A2P05997 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC27.03■■□□□ 1.92
COL5A2P05997 RNF146-204ENST00000476956 884 ntTSL 2 BASIC27.03■■□□□ 1.92
COL5A2P05997 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC27.03■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms