Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC079140.4-201ENST00000507448 529 ntBASIC18.41■□□□□ 0.54
HMGN1P05114 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.41■□□□□ 0.54
HMGN1P05114 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGN1P05114 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
HMGN1P05114 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGN1P05114 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.41■□□□□ 0.54
HMGN1P05114 AC008406.3-201ENST00000620001 1374 ntBASIC18.41■□□□□ 0.54
HMGN1P05114 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.4■□□□□ 0.54
HMGN1P05114 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.4■□□□□ 0.54
HMGN1P05114 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.4■□□□□ 0.54
HMGN1P05114 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.4■□□□□ 0.54
HMGN1P05114 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.4■□□□□ 0.54
HMGN1P05114 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
HMGN1P05114 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
HMGN1P05114 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.4■□□□□ 0.54
HMGN1P05114 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.4■□□□□ 0.54
HMGN1P05114 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.4■□□□□ 0.54
HMGN1P05114 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.4■□□□□ 0.54
HMGN1P05114 AC138907.5-202ENST00000569484 235 ntBASIC18.4■□□□□ 0.54
HMGN1P05114 AC131212.1-201ENST00000613771 668 ntBASIC18.4■□□□□ 0.54
HMGN1P05114 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.4■□□□□ 0.54
HMGN1P05114 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.4■□□□□ 0.54
HMGN1P05114 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.4■□□□□ 0.54
HMGN1P05114 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.4■□□□□ 0.54
HMGN1P05114 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.4■□□□□ 0.54
HMGN1P05114 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 AC116050.2-201ENST00000612102 1779 ntBASIC18.4■□□□□ 0.54
HMGN1P05114 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
HMGN1P05114 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.4■□□□□ 0.54
HMGN1P05114 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HMGN1P05114 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HMGN1P05114 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGN1P05114 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGN1P05114 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGN1P05114 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.39■□□□□ 0.53
HMGN1P05114 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HMGN1P05114 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.39■□□□□ 0.53
HMGN1P05114 AF213884.3-201ENST00000563833 479 ntBASIC18.39■□□□□ 0.53
HMGN1P05114 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGN1P05114 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGN1P05114 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGN1P05114 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HMGN1P05114 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HMGN1P05114 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGN1P05114 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGN1P05114 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGN1P05114 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
HMGN1P05114 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGN1P05114 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGN1P05114 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HMGN1P05114 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HMGN1P05114 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HMGN1P05114 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.39■□□□□ 0.53
HMGN1P05114 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGN1P05114 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HMGN1P05114 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGN1P05114 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.38■□□□□ 0.53
HMGN1P05114 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGN1P05114 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.38■□□□□ 0.53
HMGN1P05114 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGN1P05114 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMGN1P05114 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGN1P05114 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGN1P05114 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGN1P05114 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.38■□□□□ 0.53
HMGN1P05114 AL358852.1-201ENST00000623174 1268 ntBASIC18.38■□□□□ 0.53
HMGN1P05114 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
HMGN1P05114 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HMGN1P05114 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGN1P05114 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.38■□□□□ 0.53
HMGN1P05114 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HMGN1P05114 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGN1P05114 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGN1P05114 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGN1P05114 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMGN1P05114 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.38■□□□□ 0.53
HMGN1P05114 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
HMGN1P05114 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGN1P05114 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.37■□□□□ 0.53
HMGN1P05114 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMGN1P05114 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms