Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LCATP04180 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LCATP04180 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LCATP04180 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LCATP04180 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCATP04180 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LCATP04180 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LCATP04180 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.78■□□□□ 0.44
LCATP04180 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCATP04180 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
LCATP04180 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
LCATP04180 GABARAPL3-202ENST00000624044 1851 ntBASIC17.78■□□□□ 0.44
LCATP04180 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
LCATP04180 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LCATP04180 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
LCATP04180 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.78■□□□□ 0.44
LCATP04180 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LCATP04180 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.78■□□□□ 0.44
LCATP04180 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
LCATP04180 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.78■□□□□ 0.44
LCATP04180 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LCATP04180 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCATP04180 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCATP04180 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
LCATP04180 AL121603.2-201ENST00000557373 2117 ntBASIC17.78■□□□□ 0.44
LCATP04180 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LCATP04180 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LCATP04180 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LCATP04180 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
LCATP04180 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.77■□□□□ 0.44
LCATP04180 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LCATP04180 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LCATP04180 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.77■□□□□ 0.44
LCATP04180 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.77■□□□□ 0.44
LCATP04180 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LCATP04180 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.77■□□□□ 0.44
LCATP04180 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LCATP04180 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LCATP04180 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LCATP04180 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LCATP04180 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
LCATP04180 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
LCATP04180 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LCATP04180 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
LCATP04180 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCATP04180 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.76■□□□□ 0.43
LCATP04180 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LCATP04180 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LCATP04180 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCATP04180 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.76■□□□□ 0.43
LCATP04180 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LCATP04180 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LCATP04180 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LCATP04180 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.76■□□□□ 0.43
LCATP04180 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LCATP04180 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.76■□□□□ 0.43
LCATP04180 AL591742.1-201ENST00000604433 565 ntBASIC17.76■□□□□ 0.43
LCATP04180 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.76■□□□□ 0.43
LCATP04180 MIR2861-201ENST00000636310 90 ntBASIC17.76■□□□□ 0.43
LCATP04180 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LCATP04180 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
LCATP04180 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LCATP04180 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.76■□□□□ 0.43
LCATP04180 AC020907.5-201ENST00000624372 1936 ntBASIC17.76■□□□□ 0.43
LCATP04180 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCATP04180 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LCATP04180 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LCATP04180 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LCATP04180 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LCATP04180 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.76■□□□□ 0.43
LCATP04180 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LCATP04180 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LCATP04180 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LCATP04180 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCATP04180 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LCATP04180 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.75■□□□□ 0.43
LCATP04180 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.75■□□□□ 0.43
LCATP04180 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LCATP04180 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.75■□□□□ 0.43
LCATP04180 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LCATP04180 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LCATP04180 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.75■□□□□ 0.43
LCATP04180 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LCATP04180 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LCATP04180 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
LCATP04180 AC013268.1-206ENST00000638368 961 ntBASIC17.75■□□□□ 0.43
LCATP04180 AC112229.1-201ENST00000639295 961 ntBASIC17.75■□□□□ 0.43
LCATP04180 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCATP04180 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.75■□□□□ 0.43
LCATP04180 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCATP04180 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCATP04180 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LCATP04180 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LCATP04180 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
LCATP04180 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.75■□□□□ 0.43
LCATP04180 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.74■□□□□ 0.43
LCATP04180 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
LCATP04180 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LCATP04180 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LCATP04180 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms