Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.01■□□□□ 0.63
PDGFAP04085 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.01■□□□□ 0.63
PDGFAP04085 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFAP04085 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFAP04085 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
PDGFAP04085 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFAP04085 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFAP04085 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PDGFAP04085 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFAP04085 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFAP04085 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDGFAP04085 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFAP04085 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFAP04085 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19■□□□□ 0.63
PDGFAP04085 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19■□□□□ 0.63
PDGFAP04085 OR2A1-AS1-207ENST00000486094 819 ntBASIC19■□□□□ 0.63
PDGFAP04085 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19■□□□□ 0.63
PDGFAP04085 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19■□□□□ 0.63
PDGFAP04085 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
PDGFAP04085 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
PDGFAP04085 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDGFAP04085 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDGFAP04085 AC010542.4-201ENST00000563151 1910 ntBASIC19■□□□□ 0.63
PDGFAP04085 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19■□□□□ 0.63
PDGFAP04085 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFAP04085 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.99■□□□□ 0.63
PDGFAP04085 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFAP04085 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.99■□□□□ 0.63
PDGFAP04085 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.99■□□□□ 0.63
PDGFAP04085 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFAP04085 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFAP04085 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFAP04085 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFAP04085 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PDGFAP04085 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PDGFAP04085 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.99■□□□□ 0.63
PDGFAP04085 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.99■□□□□ 0.63
PDGFAP04085 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.99■□□□□ 0.63
PDGFAP04085 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.99■□□□□ 0.63
PDGFAP04085 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFAP04085 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFAP04085 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PDGFAP04085 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFAP04085 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFAP04085 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.99■□□□□ 0.63
PDGFAP04085 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFAP04085 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.98■□□□□ 0.63
PDGFAP04085 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.98■□□□□ 0.63
PDGFAP04085 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFAP04085 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFAP04085 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFAP04085 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PDGFAP04085 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.98■□□□□ 0.63
PDGFAP04085 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFAP04085 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFAP04085 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFAP04085 AC211429.1-201ENST00000415277 523 ntBASIC18.98■□□□□ 0.63
PDGFAP04085 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFAP04085 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.98■□□□□ 0.63
PDGFAP04085 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFAP04085 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.98■□□□□ 0.63
PDGFAP04085 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFAP04085 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFAP04085 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFAP04085 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.98■□□□□ 0.63
PDGFAP04085 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.98■□□□□ 0.63
PDGFAP04085 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PDGFAP04085 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFAP04085 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.97■□□□□ 0.63
PDGFAP04085 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.97■□□□□ 0.63
PDGFAP04085 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFAP04085 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFAP04085 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFAP04085 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFAP04085 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.97■□□□□ 0.63
PDGFAP04085 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFAP04085 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.97■□□□□ 0.63
PDGFAP04085 AC007322.3-201ENST00000426526 701 ntBASIC18.97■□□□□ 0.63
PDGFAP04085 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.97■□□□□ 0.63
PDGFAP04085 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFAP04085 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFAP04085 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PDGFAP04085 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.97■□□□□ 0.63
PDGFAP04085 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.97■□□□□ 0.63
PDGFAP04085 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFAP04085 CYP21A1P-202ENST00000354927 1481 ntBASIC18.97■□□□□ 0.63
PDGFAP04085 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.96■□□□□ 0.63
PDGFAP04085 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFAP04085 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.96■□□□□ 0.63
PDGFAP04085 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
PDGFAP04085 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFAP04085 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFAP04085 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFAP04085 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.96■□□□□ 0.63
PDGFAP04085 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.96■□□□□ 0.63
PDGFAP04085 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFAP04085 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFAP04085 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFAP04085 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFAP04085 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms