Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND1P03886 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.17■□□□□ 0.66
MT-ND1P03886 AP001330.3-201ENST00000520123 633 ntBASIC19.17■□□□□ 0.66
MT-ND1P03886 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND1P03886 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.17■□□□□ 0.66
MT-ND1P03886 AC105233.4-201ENST00000642045 216 ntBASIC19.17■□□□□ 0.66
MT-ND1P03886 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.17■□□□□ 0.66
MT-ND1P03886 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND1P03886 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MT-ND1P03886 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.17■□□□□ 0.66
MT-ND1P03886 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
MT-ND1P03886 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND1P03886 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND1P03886 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MT-ND1P03886 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND1P03886 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.16■□□□□ 0.66
MT-ND1P03886 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.16■□□□□ 0.66
MT-ND1P03886 AL355001.2-201ENST00000620617 1191 ntBASIC19.16■□□□□ 0.66
MT-ND1P03886 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.16■□□□□ 0.66
MT-ND1P03886 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND1P03886 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.16■□□□□ 0.66
MT-ND1P03886 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.16■□□□□ 0.66
MT-ND1P03886 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
MT-ND1P03886 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MT-ND1P03886 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.16■□□□□ 0.66
MT-ND1P03886 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.16■□□□□ 0.66
MT-ND1P03886 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND1P03886 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.15■□□□□ 0.66
MT-ND1P03886 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
MT-ND1P03886 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND1P03886 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND1P03886 AC092720.2-201ENST00000602388 1665 ntBASIC19.15■□□□□ 0.66
MT-ND1P03886 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.15■□□□□ 0.66
MT-ND1P03886 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.15■□□□□ 0.66
MT-ND1P03886 AC110285.6-201ENST00000617652 491 ntBASIC19.15■□□□□ 0.66
MT-ND1P03886 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND1P03886 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND1P03886 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND1P03886 RASA4CP-201ENST00000424092 1398 ntBASIC19.15■□□□□ 0.66
MT-ND1P03886 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND1P03886 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.15■□□□□ 0.66
MT-ND1P03886 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
MT-ND1P03886 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
MT-ND1P03886 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND1P03886 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
MT-ND1P03886 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND1P03886 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MT-ND1P03886 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.66
MT-ND1P03886 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MT-ND1P03886 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.14■□□□□ 0.66
MT-ND1P03886 AC018445.3-201ENST00000624177 1945 ntBASIC19.14■□□□□ 0.65
MT-ND1P03886 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
MT-ND1P03886 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MT-ND1P03886 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MT-ND1P03886 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.14■□□□□ 0.65
MT-ND1P03886 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.14■□□□□ 0.65
MT-ND1P03886 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.14■□□□□ 0.65
MT-ND1P03886 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MT-ND1P03886 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.14■□□□□ 0.65
MT-ND1P03886 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MT-ND1P03886 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MT-ND1P03886 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.14■□□□□ 0.65
MT-ND1P03886 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MT-ND1P03886 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
MT-ND1P03886 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
MT-ND1P03886 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND1P03886 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND1P03886 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
MT-ND1P03886 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND1P03886 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND1P03886 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.13■□□□□ 0.65
MT-ND1P03886 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND1P03886 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.13■□□□□ 0.65
MT-ND1P03886 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.13■□□□□ 0.65
MT-ND1P03886 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.13■□□□□ 0.65
MT-ND1P03886 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.13■□□□□ 0.65
MT-ND1P03886 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.13■□□□□ 0.65
MT-ND1P03886 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
MT-ND1P03886 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.13■□□□□ 0.65
MT-ND1P03886 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND1P03886 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND1P03886 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND1P03886 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.13■□□□□ 0.65
MT-ND1P03886 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
MT-ND1P03886 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
MT-ND1P03886 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
MT-ND1P03886 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND1P03886 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
MT-ND1P03886 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND1P03886 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND1P03886 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND1P03886 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND1P03886 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.13■□□□□ 0.65
MT-ND1P03886 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND1P03886 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND1P03886 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND1P03886 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND1P03886 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MT-ND1P03886 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
MT-ND1P03886 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms