Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LMNAP02545 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.19■□□□□ 0.98
LMNAP02545 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.19■□□□□ 0.98
LMNAP02545 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LMNAP02545 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LMNAP02545 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.19■□□□□ 0.98
LMNAP02545 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LMNAP02545 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
LMNAP02545 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
LMNAP02545 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
LMNAP02545 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
LMNAP02545 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LMNAP02545 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.19■□□□□ 0.98
LMNAP02545 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.19■□□□□ 0.98
LMNAP02545 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.19■□□□□ 0.98
LMNAP02545 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
LMNAP02545 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.19■□□□□ 0.98
LMNAP02545 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LMNAP02545 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
LMNAP02545 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LMNAP02545 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.19■□□□□ 0.98
LMNAP02545 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LMNAP02545 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.18■□□□□ 0.98
LMNAP02545 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LMNAP02545 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LMNAP02545 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.18■□□□□ 0.98
LMNAP02545 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LMNAP02545 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.18■□□□□ 0.98
LMNAP02545 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LMNAP02545 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.18■□□□□ 0.98
LMNAP02545 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LMNAP02545 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.18■□□□□ 0.98
LMNAP02545 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.18■□□□□ 0.98
LMNAP02545 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.18■□□□□ 0.98
LMNAP02545 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
LMNAP02545 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LMNAP02545 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LMNAP02545 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LMNAP02545 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
LMNAP02545 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LMNAP02545 AC007952.6-201ENST00000573168 2673 ntBASIC21.17■□□□□ 0.98
LMNAP02545 AC003957.1-201ENST00000625108 2673 ntBASIC21.17■□□□□ 0.98
LMNAP02545 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LMNAP02545 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LMNAP02545 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LMNAP02545 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LMNAP02545 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.17■□□□□ 0.98
LMNAP02545 AL162412.1-201ENST00000567129 965 ntBASIC21.17■□□□□ 0.98
LMNAP02545 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.17■□□□□ 0.98
LMNAP02545 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.17■□□□□ 0.98
LMNAP02545 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.17■□□□□ 0.98
LMNAP02545 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.17■□□□□ 0.98
LMNAP02545 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LMNAP02545 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
LMNAP02545 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
LMNAP02545 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LMNAP02545 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LMNAP02545 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LMNAP02545 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LMNAP02545 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LMNAP02545 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LMNAP02545 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
LMNAP02545 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.16■□□□□ 0.98
LMNAP02545 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.16■□□□□ 0.98
LMNAP02545 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
LMNAP02545 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LMNAP02545 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LMNAP02545 LSM12P1-201ENST00000411836 588 ntBASIC21.16■□□□□ 0.98
LMNAP02545 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.16■□□□□ 0.98
LMNAP02545 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LMNAP02545 AL157384.1-201ENST00000445995 2473 ntBASIC21.16■□□□□ 0.98
LMNAP02545 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LMNAP02545 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
LMNAP02545 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LMNAP02545 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.16■□□□□ 0.98
LMNAP02545 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
LMNAP02545 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LMNAP02545 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LMNAP02545 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.15■□□□□ 0.98
LMNAP02545 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LMNAP02545 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LMNAP02545 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LMNAP02545 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LMNAP02545 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.15■□□□□ 0.98
LMNAP02545 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.15■□□□□ 0.98
LMNAP02545 KRT17P3-201ENST00000420566 1262 ntBASIC21.15■□□□□ 0.98
LMNAP02545 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LMNAP02545 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
LMNAP02545 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LMNAP02545 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LMNAP02545 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.15■□□□□ 0.98
LMNAP02545 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LMNAP02545 AC244015.2-201ENST00000616358 1861 ntBASIC21.15■□□□□ 0.98
LMNAP02545 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LMNAP02545 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
LMNAP02545 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.15■□□□□ 0.98
LMNAP02545 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LMNAP02545 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LMNAP02545 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.14■□□□□ 0.98
LMNAP02545 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms