Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX6O95475 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.04■□□□□ 0.32
SIX6O95475 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX6O95475 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.04■□□□□ 0.32
SIX6O95475 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.04■□□□□ 0.32
SIX6O95475 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SIX6O95475 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SIX6O95475 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SIX6O95475 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX6O95475 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX6O95475 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
SIX6O95475 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SIX6O95475 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX6O95475 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.04■□□□□ 0.32
SIX6O95475 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.04■□□□□ 0.32
SIX6O95475 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.04■□□□□ 0.32
SIX6O95475 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.04■□□□□ 0.32
SIX6O95475 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX6O95475 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX6O95475 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX6O95475 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX6O95475 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX6O95475 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.04■□□□□ 0.32
SIX6O95475 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX6O95475 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX6O95475 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX6O95475 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIX6O95475 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX6O95475 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
SIX6O95475 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX6O95475 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.03■□□□□ 0.32
SIX6O95475 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX6O95475 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.03■□□□□ 0.32
SIX6O95475 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
SIX6O95475 AC137630.3-201ENST00000607245 391 ntBASIC17.03■□□□□ 0.32
SIX6O95475 AC068587.7-201ENST00000641602 218 ntBASIC17.03■□□□□ 0.32
SIX6O95475 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.03■□□□□ 0.32
SIX6O95475 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX6O95475 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIX6O95475 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.03■□□□□ 0.32
SIX6O95475 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIX6O95475 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIX6O95475 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX6O95475 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.03■□□□□ 0.32
SIX6O95475 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIX6O95475 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.03■□□□□ 0.32
SIX6O95475 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SIX6O95475 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SIX6O95475 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SIX6O95475 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX6O95475 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SIX6O95475 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX6O95475 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX6O95475 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX6O95475 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SIX6O95475 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIX6O95475 AC092720.2-201ENST00000602388 1665 ntBASIC17.02■□□□□ 0.32
SIX6O95475 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SIX6O95475 AC087239.1-201ENST00000622671 572 ntBASIC17.02■□□□□ 0.32
SIX6O95475 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.02■□□□□ 0.32
SIX6O95475 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SIX6O95475 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
SIX6O95475 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.02■□□□□ 0.31
SIX6O95475 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.02■□□□□ 0.31
SIX6O95475 AC093484.2-201ENST00000580996 2166 ntBASIC17.02■□□□□ 0.31
SIX6O95475 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SIX6O95475 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SIX6O95475 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.01■□□□□ 0.31
SIX6O95475 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX6O95475 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX6O95475 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SIX6O95475 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIX6O95475 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SIX6O95475 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX6O95475 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
SIX6O95475 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SIX6O95475 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX6O95475 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX6O95475 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIX6O95475 AC010141.3-201ENST00000456659 717 ntBASIC17.01■□□□□ 0.31
SIX6O95475 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.01■□□□□ 0.31
SIX6O95475 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.01■□□□□ 0.31
SIX6O95475 AC074183.2-201ENST00000623112 922 ntBASIC17.01■□□□□ 0.31
SIX6O95475 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SIX6O95475 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX6O95475 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SIX6O95475 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
SIX6O95475 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX6O95475 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX6O95475 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIX6O95475 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
SIX6O95475 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.01■□□□□ 0.31
SIX6O95475 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SIX6O95475 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIX6O95475 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.01■□□□□ 0.31
SIX6O95475 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SIX6O95475 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SIX6O95475 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17■□□□□ 0.31
SIX6O95475 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17■□□□□ 0.31
SIX6O95475 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms