Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCN2BO60939 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN2BO60939 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.31■□□□□ 0.68
SCN2BO60939 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN2BO60939 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN2BO60939 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCN2BO60939 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCN2BO60939 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SCN2BO60939 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN2BO60939 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SCN2BO60939 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
SCN2BO60939 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN2BO60939 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.3■□□□□ 0.68
SCN2BO60939 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN2BO60939 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.3■□□□□ 0.68
SCN2BO60939 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCN2BO60939 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SCN2BO60939 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCN2BO60939 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.3■□□□□ 0.68
SCN2BO60939 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.3■□□□□ 0.68
SCN2BO60939 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.3■□□□□ 0.68
SCN2BO60939 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SCN2BO60939 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.3■□□□□ 0.68
SCN2BO60939 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN2BO60939 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN2BO60939 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SCN2BO60939 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN2BO60939 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.3■□□□□ 0.68
SCN2BO60939 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
SCN2BO60939 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCN2BO60939 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.29■□□□□ 0.68
SCN2BO60939 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN2BO60939 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN2BO60939 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.29■□□□□ 0.68
SCN2BO60939 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN2BO60939 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN2BO60939 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN2BO60939 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
SCN2BO60939 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SCN2BO60939 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.29■□□□□ 0.68
SCN2BO60939 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SCN2BO60939 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN2BO60939 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCN2BO60939 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN2BO60939 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SCN2BO60939 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCN2BO60939 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN2BO60939 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN2BO60939 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SCN2BO60939 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN2BO60939 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN2BO60939 TCF3P1-201ENST00000423021 1937 ntBASIC19.28■□□□□ 0.68
SCN2BO60939 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN2BO60939 ZNRF2P3-201ENST00000424200 374 ntBASIC19.28■□□□□ 0.68
SCN2BO60939 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN2BO60939 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.28■□□□□ 0.68
SCN2BO60939 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.28■□□□□ 0.68
SCN2BO60939 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.28■□□□□ 0.68
SCN2BO60939 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN2BO60939 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN2BO60939 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCN2BO60939 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.28■□□□□ 0.68
SCN2BO60939 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCN2BO60939 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
SCN2BO60939 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SCN2BO60939 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCN2BO60939 AC019069.1-201ENST00000610008 1333 ntBASIC19.27■□□□□ 0.68
SCN2BO60939 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SCN2BO60939 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.27■□□□□ 0.68
SCN2BO60939 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCN2BO60939 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCN2BO60939 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCN2BO60939 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCN2BO60939 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.27■□□□□ 0.68
SCN2BO60939 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SCN2BO60939 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
SCN2BO60939 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.27■□□□□ 0.68
SCN2BO60939 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCN2BO60939 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCN2BO60939 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCN2BO60939 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
SCN2BO60939 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCN2BO60939 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SCN2BO60939 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SCN2BO60939 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
SCN2BO60939 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SCN2BO60939 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCN2BO60939 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SCN2BO60939 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SCN2BO60939 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCN2BO60939 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCN2BO60939 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SCN2BO60939 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.26■□□□□ 0.67
SCN2BO60939 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCN2BO60939 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.26■□□□□ 0.67
SCN2BO60939 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCN2BO60939 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.26■□□□□ 0.67
SCN2BO60939 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.26■□□□□ 0.67
SCN2BO60939 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.26■□□□□ 0.67
SCN2BO60939 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms