Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 SMG8-203ENST00000578922 2178 ntBASIC20.03■□□□□ 0.8
TRIM13O60858 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM13O60858 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM13O60858 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM13O60858 AL031432.3-201ENST00000607698 485 ntBASIC20.03■□□□□ 0.8
TRIM13O60858 AC110285.6-201ENST00000617652 491 ntBASIC20.03■□□□□ 0.8
TRIM13O60858 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM13O60858 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM13O60858 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM13O60858 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TRIM13O60858 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM13O60858 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM13O60858 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM13O60858 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM13O60858 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM13O60858 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM13O60858 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM13O60858 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM13O60858 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM13O60858 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM13O60858 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM13O60858 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM13O60858 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM13O60858 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM13O60858 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM13O60858 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM13O60858 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM13O60858 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TRIM13O60858 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM13O60858 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM13O60858 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM13O60858 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
TRIM13O60858 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM13O60858 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRIM13O60858 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM13O60858 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM13O60858 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM13O60858 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM13O60858 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM13O60858 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM13O60858 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM13O60858 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM13O60858 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM13O60858 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
TRIM13O60858 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM13O60858 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM13O60858 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20■□□□□ 0.79
TRIM13O60858 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM13O60858 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM13O60858 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM13O60858 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM13O60858 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20■□□□□ 0.79
TRIM13O60858 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM13O60858 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM13O60858 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20■□□□□ 0.79
TRIM13O60858 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM13O60858 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20■□□□□ 0.79
TRIM13O60858 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20■□□□□ 0.79
TRIM13O60858 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20■□□□□ 0.79
TRIM13O60858 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20■□□□□ 0.79
TRIM13O60858 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRIM13O60858 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM13O60858 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20■□□□□ 0.79
TRIM13O60858 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TRIM13O60858 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM13O60858 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM13O60858 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRIM13O60858 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
TRIM13O60858 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM13O60858 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM13O60858 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM13O60858 AC010141.2-201ENST00000452426 721 ntBASIC19.99■□□□□ 0.79
TRIM13O60858 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM13O60858 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
TRIM13O60858 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM13O60858 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM13O60858 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TRIM13O60858 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM13O60858 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM13O60858 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM13O60858 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
TRIM13O60858 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.98■□□□□ 0.79
TRIM13O60858 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM13O60858 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM13O60858 SUDS3P1-201ENST00000505831 966 ntBASIC19.98■□□□□ 0.79
TRIM13O60858 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM13O60858 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.98■□□□□ 0.79
TRIM13O60858 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TRIM13O60858 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM13O60858 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM13O60858 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM13O60858 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM13O60858 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM13O60858 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM13O60858 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM13O60858 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.98■□□□□ 0.79
TRIM13O60858 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM13O60858 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM13O60858 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM13O60858 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms