Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.42■□□□□ 0.22
CUBNO60494 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CUBNO60494 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.42■□□□□ 0.22
CUBNO60494 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.42■□□□□ 0.22
CUBNO60494 AL390955.1-201ENST00000428694 934 ntBASIC16.42■□□□□ 0.22
CUBNO60494 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.41■□□□□ 0.22
CUBNO60494 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CUBNO60494 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CUBNO60494 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CUBNO60494 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CUBNO60494 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.41■□□□□ 0.22
CUBNO60494 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.41■□□□□ 0.22
CUBNO60494 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.41■□□□□ 0.22
CUBNO60494 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CUBNO60494 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.41■□□□□ 0.22
CUBNO60494 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CUBNO60494 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.41■□□□□ 0.22
CUBNO60494 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CUBNO60494 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CUBNO60494 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CUBNO60494 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.4■□□□□ 0.22
CUBNO60494 UPK3BP1-201ENST00000428678 509 ntBASIC16.4■□□□□ 0.22
CUBNO60494 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.4■□□□□ 0.22
CUBNO60494 AC005363.2-201ENST00000618631 242 ntBASIC16.4■□□□□ 0.22
CUBNO60494 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CUBNO60494 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CUBNO60494 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CUBNO60494 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CUBNO60494 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CUBNO60494 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CUBNO60494 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.4■□□□□ 0.22
CUBNO60494 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.4■□□□□ 0.22
CUBNO60494 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.4■□□□□ 0.22
CUBNO60494 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CUBNO60494 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CUBNO60494 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CUBNO60494 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CUBNO60494 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CUBNO60494 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.4■□□□□ 0.22
CUBNO60494 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.4■□□□□ 0.22
CUBNO60494 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.4■□□□□ 0.22
CUBNO60494 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CUBNO60494 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CUBNO60494 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.4■□□□□ 0.22
CUBNO60494 SLC25A3P1-201ENST00000443844 931 ntBASIC16.4■□□□□ 0.22
CUBNO60494 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CUBNO60494 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CUBNO60494 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
CUBNO60494 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CUBNO60494 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.39■□□□□ 0.21
CUBNO60494 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.39■□□□□ 0.21
CUBNO60494 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CUBNO60494 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CUBNO60494 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.39■□□□□ 0.21
CUBNO60494 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.39■□□□□ 0.21
CUBNO60494 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CUBNO60494 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.39■□□□□ 0.21
CUBNO60494 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.39■□□□□ 0.21
CUBNO60494 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CUBNO60494 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.39■□□□□ 0.21
CUBNO60494 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CUBNO60494 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CUBNO60494 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CUBNO60494 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.39■□□□□ 0.21
CUBNO60494 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.39■□□□□ 0.21
CUBNO60494 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.39■□□□□ 0.21
CUBNO60494 MYC-208ENST00000641036 567 ntBASIC16.39■□□□□ 0.21
CUBNO60494 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.39■□□□□ 0.21
CUBNO60494 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.39■□□□□ 0.21
CUBNO60494 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CUBNO60494 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CUBNO60494 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CUBNO60494 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.38■□□□□ 0.21
CUBNO60494 AC104076.2-201ENST00000448912 469 ntBASIC16.38■□□□□ 0.21
CUBNO60494 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CUBNO60494 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CUBNO60494 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CUBNO60494 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CUBNO60494 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CUBNO60494 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.38■□□□□ 0.21
CUBNO60494 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.38■□□□□ 0.21
CUBNO60494 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CUBNO60494 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.38■□□□□ 0.21
CUBNO60494 AC087388.1-201ENST00000571370 1112 ntBASIC16.38■□□□□ 0.21
CUBNO60494 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CUBNO60494 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CUBNO60494 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.38■□□□□ 0.21
CUBNO60494 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CUBNO60494 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.38■□□□□ 0.21
CUBNO60494 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CUBNO60494 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CUBNO60494 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.38■□□□□ 0.21
CUBNO60494 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
CUBNO60494 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CUBNO60494 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CUBNO60494 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CUBNO60494 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CUBNO60494 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CUBNO60494 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CUBNO60494 KRT18P22-201ENST00000402024 1347 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms