Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
SLC28A2O43868 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC28A2O43868 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SLC28A2O43868 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SLC28A2O43868 AC068338.2-201ENST00000563278 1430 ntBASIC19.57■□□□□ 0.72
SLC28A2O43868 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC28A2O43868 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
SLC28A2O43868 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC28A2O43868 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.57■□□□□ 0.72
SLC28A2O43868 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC28A2O43868 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
SLC28A2O43868 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC28A2O43868 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC28A2O43868 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC28A2O43868 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC28A2O43868 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC28A2O43868 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SLC28A2O43868 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC28A2O43868 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC28A2O43868 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC28A2O43868 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC28A2O43868 AC093787.1-201ENST00000450396 207 ntBASIC19.56■□□□□ 0.72
SLC28A2O43868 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC28A2O43868 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SLC28A2O43868 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.56■□□□□ 0.72
SLC28A2O43868 MIR4497-201ENST00000583208 89 ntBASIC19.56■□□□□ 0.72
SLC28A2O43868 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC28A2O43868 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SLC28A2O43868 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.56■□□□□ 0.72
SLC28A2O43868 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC28A2O43868 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC28A2O43868 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC28A2O43868 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SLC28A2O43868 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC28A2O43868 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC28A2O43868 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.55■□□□□ 0.72
SLC28A2O43868 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC28A2O43868 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC28A2O43868 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.55■□□□□ 0.72
SLC28A2O43868 AC026366.1-201ENST00000488803 879 ntBASIC19.55■□□□□ 0.72
SLC28A2O43868 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.55■□□□□ 0.72
SLC28A2O43868 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SLC28A2O43868 AC069236.1-201ENST00000604339 616 ntBASIC19.55■□□□□ 0.72
SLC28A2O43868 AC016405.3-201ENST00000607710 860 ntBASIC19.55■□□□□ 0.72
SLC28A2O43868 MYC-209ENST00000641252 345 ntBASIC19.55■□□□□ 0.72
SLC28A2O43868 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC28A2O43868 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC28A2O43868 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SLC28A2O43868 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SLC28A2O43868 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC28A2O43868 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A2O43868 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A2O43868 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SLC28A2O43868 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A2O43868 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SLC28A2O43868 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A2O43868 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A2O43868 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SLC28A2O43868 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.54■□□□□ 0.72
SLC28A2O43868 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A2O43868 UNC93B5-201ENST00000530315 699 ntBASIC19.54■□□□□ 0.72
SLC28A2O43868 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC28A2O43868 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A2O43868 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.54■□□□□ 0.72
SLC28A2O43868 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A2O43868 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SLC28A2O43868 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A2O43868 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A2O43868 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A2O43868 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A2O43868 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.54■□□□□ 0.72
SLC28A2O43868 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A2O43868 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SLC28A2O43868 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A2O43868 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A2O43868 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC28A2O43868 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A2O43868 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A2O43868 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A2O43868 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A2O43868 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A2O43868 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A2O43868 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A2O43868 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC28A2O43868 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC28A2O43868 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.53■□□□□ 0.72
SLC28A2O43868 TERF1P5-201ENST00000477545 1207 ntBASIC19.53■□□□□ 0.72
SLC28A2O43868 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.53■□□□□ 0.72
SLC28A2O43868 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.53■□□□□ 0.72
SLC28A2O43868 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.53■□□□□ 0.72
SLC28A2O43868 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
SLC28A2O43868 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SLC28A2O43868 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC28A2O43868 SLC25A24-204ENST00000569674 2357 ntBASIC19.52■□□□□ 0.72
SLC28A2O43868 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC28A2O43868 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC28A2O43868 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC28A2O43868 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC28A2O43868 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC28A2O43868 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms