Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 AC100791.3-201ENST00000617619 330 ntBASIC18.16■□□□□ 0.5
TRAF3IP2O43734 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAF3IP2O43734 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 AC026185.1-201ENST00000445748 174 ntBASIC18.15■□□□□ 0.5
TRAF3IP2O43734 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 AC008694.1-202ENST00000636953 945 ntBASIC18.15■□□□□ 0.5
TRAF3IP2O43734 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAF3IP2O43734 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.14■□□□□ 0.5
TRAF3IP2O43734 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.14■□□□□ 0.5
TRAF3IP2O43734 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.14■□□□□ 0.5
TRAF3IP2O43734 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TRAF3IP2O43734 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TRAF3IP2O43734 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.14■□□□□ 0.5
TRAF3IP2O43734 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP2O43734 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP2O43734 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP2O43734 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRAF3IP2O43734 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP2O43734 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP2O43734 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP2O43734 PGM5P4-201ENST00000421970 445 ntBASIC18.14■□□□□ 0.49
TRAF3IP2O43734 AL050303.2-201ENST00000619798 666 ntBASIC18.14■□□□□ 0.49
TRAF3IP2O43734 OR10C1-204ENST00000622521 1039 ntBASIC18.14■□□□□ 0.49
TRAF3IP2O43734 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP2O43734 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP2O43734 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRAF3IP2O43734 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAF3IP2O43734 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAF3IP2O43734 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP2O43734 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAF3IP2O43734 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAF3IP2O43734 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP2O43734 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAF3IP2O43734 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAF3IP2O43734 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAF3IP2O43734 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 AC092720.2-201ENST00000602388 1665 ntBASIC18.13■□□□□ 0.49
TRAF3IP2O43734 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 MIR663A-201ENST00000385250 93 ntBASIC18.13■□□□□ 0.49
TRAF3IP2O43734 MCRIP2P1-201ENST00000394346 511 ntBASIC18.13■□□□□ 0.49
TRAF3IP2O43734 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 AL356652.1-201ENST00000615962 565 ntBASIC18.13■□□□□ 0.49
TRAF3IP2O43734 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAF3IP2O43734 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms