Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF13O43567 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF13O43567 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF13O43567 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RNF13O43567 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF13O43567 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RNF13O43567 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RNF13O43567 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF13O43567 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RNF13O43567 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF13O43567 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF13O43567 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF13O43567 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF13O43567 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF13O43567 NTF6G-201ENST00000591094 616 ntBASIC18.5■□□□□ 0.55
RNF13O43567 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF13O43567 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF13O43567 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF13O43567 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RNF13O43567 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF13O43567 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF13O43567 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RNF13O43567 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RNF13O43567 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF13O43567 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF13O43567 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF13O43567 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF13O43567 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF13O43567 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF13O43567 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF13O43567 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF13O43567 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF13O43567 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF13O43567 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.49■□□□□ 0.55
RNF13O43567 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF13O43567 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF13O43567 MIR6821-201ENST00000617625 74 ntBASIC18.49■□□□□ 0.55
RNF13O43567 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF13O43567 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.49■□□□□ 0.55
RNF13O43567 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF13O43567 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF13O43567 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF13O43567 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
RNF13O43567 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RNF13O43567 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF13O43567 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF13O43567 AIRN-201ENST00000601203 4374 ntBASIC18.49■□□□□ 0.55
RNF13O43567 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF13O43567 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RNF13O43567 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF13O43567 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF13O43567 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF13O43567 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RNF13O43567 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF13O43567 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF13O43567 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF13O43567 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF13O43567 AC116050.2-201ENST00000612102 1779 ntBASIC18.48■□□□□ 0.55
RNF13O43567 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF13O43567 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF13O43567 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF13O43567 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF13O43567 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF13O43567 KRT18P61-201ENST00000585825 1298 ntBASIC18.48■□□□□ 0.55
RNF13O43567 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF13O43567 AC087623.3-201ENST00000607047 1098 ntBASIC18.48■□□□□ 0.55
RNF13O43567 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF13O43567 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF13O43567 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF13O43567 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF13O43567 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RNF13O43567 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RNF13O43567 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RNF13O43567 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF13O43567 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF13O43567 RNF165-205ENST00000588679 2904 ntBASIC18.47■□□□□ 0.55
RNF13O43567 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF13O43567 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF13O43567 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF13O43567 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF13O43567 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF13O43567 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF13O43567 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF13O43567 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF13O43567 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF13O43567 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF13O43567 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.47■□□□□ 0.55
RNF13O43567 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.47■□□□□ 0.55
RNF13O43567 SLC7A5P1-201ENST00000568957 537 ntBASIC18.47■□□□□ 0.55
RNF13O43567 UBE2DNL-204ENST00000602536 740 ntBASIC18.47■□□□□ 0.55
RNF13O43567 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF13O43567 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF13O43567 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF13O43567 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF13O43567 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF13O43567 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF13O43567 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF13O43567 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF13O43567 AC020907.5-201ENST00000624372 1936 ntBASIC18.47■□□□□ 0.55
RNF13O43567 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms