Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC3O15379 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC3O15379 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC3O15379 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC3O15379 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC3O15379 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC3O15379 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
HDAC3O15379 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC3O15379 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC3O15379 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC3O15379 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.8■□□□□ 0.76
HDAC3O15379 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.8■□□□□ 0.76
HDAC3O15379 AP001330.3-201ENST00000520123 633 ntBASIC19.8■□□□□ 0.76
HDAC3O15379 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.8■□□□□ 0.76
HDAC3O15379 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
HDAC3O15379 TPRG1LP1-201ENST00000598702 760 ntBASIC19.8■□□□□ 0.76
HDAC3O15379 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.8■□□□□ 0.76
HDAC3O15379 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC3O15379 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC3O15379 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC3O15379 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.8■□□□□ 0.76
HDAC3O15379 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC3O15379 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC3O15379 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.8■□□□□ 0.76
HDAC3O15379 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HDAC3O15379 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HDAC3O15379 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HDAC3O15379 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.79■□□□□ 0.76
HDAC3O15379 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
HDAC3O15379 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC3O15379 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HDAC3O15379 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC3O15379 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HDAC3O15379 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC3O15379 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC3O15379 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HDAC3O15379 AC018445.3-201ENST00000624177 1945 ntBASIC19.79■□□□□ 0.76
HDAC3O15379 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC3O15379 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC3O15379 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.79■□□□□ 0.76
HDAC3O15379 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.79■□□□□ 0.76
HDAC3O15379 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC3O15379 AC116050.2-201ENST00000612102 1779 ntBASIC19.79■□□□□ 0.76
HDAC3O15379 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC3O15379 AL158211.5-201ENST00000623583 2518 ntBASIC19.79■□□□□ 0.76
HDAC3O15379 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC3O15379 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.79■□□□□ 0.76
HDAC3O15379 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC3O15379 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC3O15379 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC3O15379 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.79■□□□□ 0.76
HDAC3O15379 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.79■□□□□ 0.76
HDAC3O15379 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HDAC3O15379 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HDAC3O15379 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
HDAC3O15379 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.78■□□□□ 0.76
HDAC3O15379 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HDAC3O15379 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
HDAC3O15379 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.78■□□□□ 0.76
HDAC3O15379 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.78■□□□□ 0.76
HDAC3O15379 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HDAC3O15379 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HDAC3O15379 RASA4CP-201ENST00000424092 1398 ntBASIC19.78■□□□□ 0.76
HDAC3O15379 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
HDAC3O15379 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HDAC3O15379 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HDAC3O15379 BX323043.1-201ENST00000641006 1765 ntBASIC19.78■□□□□ 0.76
HDAC3O15379 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC3O15379 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC3O15379 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.77■□□□□ 0.76
HDAC3O15379 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC3O15379 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC3O15379 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC3O15379 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.77■□□□□ 0.76
HDAC3O15379 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.77■□□□□ 0.76
HDAC3O15379 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC3O15379 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC3O15379 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
HDAC3O15379 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC3O15379 KRT87P-202ENST00000534226 1464 ntBASIC19.77■□□□□ 0.76
HDAC3O15379 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC3O15379 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC3O15379 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HDAC3O15379 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HDAC3O15379 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
HDAC3O15379 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HDAC3O15379 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC3O15379 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HDAC3O15379 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
HDAC3O15379 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HDAC3O15379 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC3O15379 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
HDAC3O15379 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC3O15379 EDA-201ENST00000338901 1233 ntBASIC19.76■□□□□ 0.75
HDAC3O15379 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HDAC3O15379 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.76■□□□□ 0.75
HDAC3O15379 PBX2P1-201ENST00000493219 1291 ntBASIC19.76■□□□□ 0.75
HDAC3O15379 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.76■□□□□ 0.75
HDAC3O15379 AC138907.5-202ENST00000569484 235 ntBASIC19.76■□□□□ 0.75
HDAC3O15379 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms