Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.78■□□□□ 0.76
UBFD1O14562 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBFD1O14562 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBFD1O14562 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBFD1O14562 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBFD1O14562 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.77■□□□□ 0.76
UBFD1O14562 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBFD1O14562 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBFD1O14562 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBFD1O14562 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
UBFD1O14562 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.77■□□□□ 0.76
UBFD1O14562 KRT18P14-201ENST00000534205 1250 ntBASIC19.77■□□□□ 0.76
UBFD1O14562 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.77■□□□□ 0.76
UBFD1O14562 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.77■□□□□ 0.76
UBFD1O14562 AC243732.1-201ENST00000612648 864 ntBASIC19.77■□□□□ 0.76
UBFD1O14562 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.77■□□□□ 0.76
UBFD1O14562 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
UBFD1O14562 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBFD1O14562 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBFD1O14562 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.77■□□□□ 0.76
UBFD1O14562 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.77■□□□□ 0.76
UBFD1O14562 KRT8P36-201ENST00000489121 1440 ntBASIC19.76■□□□□ 0.75
UBFD1O14562 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
UBFD1O14562 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBFD1O14562 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBFD1O14562 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
UBFD1O14562 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBFD1O14562 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBFD1O14562 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.76■□□□□ 0.75
UBFD1O14562 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.76■□□□□ 0.75
UBFD1O14562 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
UBFD1O14562 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
UBFD1O14562 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.76■□□□□ 0.75
UBFD1O14562 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.76■□□□□ 0.75
UBFD1O14562 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBFD1O14562 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.76■□□□□ 0.75
UBFD1O14562 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBFD1O14562 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBFD1O14562 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
UBFD1O14562 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBFD1O14562 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBFD1O14562 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBFD1O14562 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBFD1O14562 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.75■□□□□ 0.75
UBFD1O14562 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.75■□□□□ 0.75
UBFD1O14562 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
UBFD1O14562 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBFD1O14562 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.75■□□□□ 0.75
UBFD1O14562 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBFD1O14562 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.75■□□□□ 0.75
UBFD1O14562 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
UBFD1O14562 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBFD1O14562 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBFD1O14562 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.75■□□□□ 0.75
UBFD1O14562 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBFD1O14562 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBFD1O14562 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBFD1O14562 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBFD1O14562 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBFD1O14562 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.74■□□□□ 0.75
UBFD1O14562 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.74■□□□□ 0.75
UBFD1O14562 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.74■□□□□ 0.75
UBFD1O14562 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBFD1O14562 SLC7A5P1-201ENST00000568957 537 ntBASIC19.74■□□□□ 0.75
UBFD1O14562 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.74■□□□□ 0.75
UBFD1O14562 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBFD1O14562 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBFD1O14562 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.74■□□□□ 0.75
UBFD1O14562 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.74■□□□□ 0.75
UBFD1O14562 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.74■□□□□ 0.75
UBFD1O14562 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.74■□□□□ 0.75
UBFD1O14562 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBFD1O14562 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
UBFD1O14562 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.73■□□□□ 0.75
UBFD1O14562 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
UBFD1O14562 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.73■□□□□ 0.75
UBFD1O14562 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBFD1O14562 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBFD1O14562 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBFD1O14562 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBFD1O14562 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBFD1O14562 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.73■□□□□ 0.75
UBFD1O14562 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
UBFD1O14562 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.73■□□□□ 0.75
UBFD1O14562 AC007322.3-201ENST00000426526 701 ntBASIC19.73■□□□□ 0.75
UBFD1O14562 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
UBFD1O14562 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.73■□□□□ 0.75
UBFD1O14562 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.73■□□□□ 0.75
UBFD1O14562 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.73■□□□□ 0.75
UBFD1O14562 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.73■□□□□ 0.75
UBFD1O14562 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBFD1O14562 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
UBFD1O14562 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBFD1O14562 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
UBFD1O14562 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.73■□□□□ 0.75
UBFD1O14562 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBFD1O14562 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBFD1O14562 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBFD1O14562 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
UBFD1O14562 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms