Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.68■□□□□ 0.74
SDHDO14521 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.68■□□□□ 0.74
SDHDO14521 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.68■□□□□ 0.74
SDHDO14521 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDHDO14521 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDHDO14521 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SDHDO14521 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.68■□□□□ 0.74
SDHDO14521 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDHDO14521 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDHDO14521 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDHDO14521 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.67■□□□□ 0.74
SDHDO14521 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.67■□□□□ 0.74
SDHDO14521 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SDHDO14521 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDHDO14521 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SDHDO14521 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDHDO14521 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SDHDO14521 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SDHDO14521 AC110285.6-201ENST00000617652 491 ntBASIC19.67■□□□□ 0.74
SDHDO14521 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDHDO14521 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDHDO14521 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SDHDO14521 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDHDO14521 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDHDO14521 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDHDO14521 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.67■□□□□ 0.74
SDHDO14521 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SDHDO14521 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDHDO14521 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDHDO14521 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SDHDO14521 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.66■□□□□ 0.74
SDHDO14521 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.66■□□□□ 0.74
SDHDO14521 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDHDO14521 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDHDO14521 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDHDO14521 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
SDHDO14521 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDHDO14521 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDHDO14521 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDHDO14521 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.66■□□□□ 0.74
SDHDO14521 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.66■□□□□ 0.74
SDHDO14521 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.66■□□□□ 0.74
SDHDO14521 AC010141.2-201ENST00000452426 721 ntBASIC19.66■□□□□ 0.74
SDHDO14521 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.66■□□□□ 0.74
SDHDO14521 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.66■□□□□ 0.74
SDHDO14521 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.66■□□□□ 0.74
SDHDO14521 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.66■□□□□ 0.74
SDHDO14521 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.66■□□□□ 0.74
SDHDO14521 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDHDO14521 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDHDO14521 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDHDO14521 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SDHDO14521 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDHDO14521 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.66■□□□□ 0.74
SDHDO14521 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDHDO14521 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SDHDO14521 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDHDO14521 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.65■□□□□ 0.74
SDHDO14521 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDHDO14521 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.65■□□□□ 0.74
SDHDO14521 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.65■□□□□ 0.74
SDHDO14521 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.65■□□□□ 0.74
SDHDO14521 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDHDO14521 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SDHDO14521 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.65■□□□□ 0.74
SDHDO14521 MIR6084-201ENST00000622012 110 ntBASIC19.65■□□□□ 0.74
SDHDO14521 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.65■□□□□ 0.74
SDHDO14521 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SDHDO14521 AC008406.3-201ENST00000620001 1374 ntBASIC19.65■□□□□ 0.74
SDHDO14521 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SDHDO14521 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SDHDO14521 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SDHDO14521 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SDHDO14521 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SDHDO14521 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SDHDO14521 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.74
SDHDO14521 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SDHDO14521 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SDHDO14521 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SDHDO14521 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.64■□□□□ 0.73
SDHDO14521 AC120498.10-201ENST00000621827 505 ntBASIC19.64■□□□□ 0.73
SDHDO14521 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.64■□□□□ 0.73
SDHDO14521 AL358852.1-201ENST00000623174 1268 ntBASIC19.64■□□□□ 0.73
SDHDO14521 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SDHDO14521 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SDHDO14521 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.64■□□□□ 0.73
SDHDO14521 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SDHDO14521 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SDHDO14521 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SDHDO14521 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SDHDO14521 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
SDHDO14521 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDHDO14521 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDHDO14521 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SDHDO14521 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.63■□□□□ 0.73
SDHDO14521 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.63■□□□□ 0.73
SDHDO14521 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDHDO14521 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDHDO14521 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDHDO14521 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms