Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SOX1O00570 INGX-201ENST00000359239 846 ntBASIC21.91■■□□□ 1.1
SOX1O00570 RNF152P1-201ENST00000397754 604 ntBASIC21.91■■□□□ 1.1
SOX1O00570 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.91■■□□□ 1.1
SOX1O00570 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.91■■□□□ 1.1
SOX1O00570 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.91■■□□□ 1.1
SOX1O00570 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.91■■□□□ 1.1
SOX1O00570 FAM87A-204ENST00000613235 858 ntBASIC21.91■■□□□ 1.1
SOX1O00570 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.91■■□□□ 1.1
SOX1O00570 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SOX1O00570 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.91■■□□□ 1.1
SOX1O00570 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SOX1O00570 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.91■■□□□ 1.1
SOX1O00570 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SOX1O00570 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.91■■□□□ 1.1
SOX1O00570 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SOX1O00570 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SOX1O00570 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.9■■□□□ 1.1
SOX1O00570 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SOX1O00570 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.9■■□□□ 1.1
SOX1O00570 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SOX1O00570 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.9■■□□□ 1.1
SOX1O00570 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.9■■□□□ 1.1
SOX1O00570 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
SOX1O00570 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SOX1O00570 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.9■■□□□ 1.1
SOX1O00570 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.9■■□□□ 1.1
SOX1O00570 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SOX1O00570 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SOX1O00570 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.9■■□□□ 1.1
SOX1O00570 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
SOX1O00570 C11orf96-202ENST00000528572 1834 ntBASIC21.9■■□□□ 1.1
SOX1O00570 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
SOX1O00570 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
SOX1O00570 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SOX1O00570 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.89■■□□□ 1.1
SOX1O00570 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.89■■□□□ 1.09
SOX1O00570 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.89■■□□□ 1.09
SOX1O00570 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.89■■□□□ 1.09
SOX1O00570 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.89■■□□□ 1.09
SOX1O00570 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SOX1O00570 EGLN1P1-201ENST00000531623 762 ntBASIC21.89■■□□□ 1.09
SOX1O00570 C2orf69P3-201ENST00000565542 1120 ntBASIC21.89■■□□□ 1.09
SOX1O00570 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SOX1O00570 AL121956.5-201ENST00000625261 221 ntBASIC21.89■■□□□ 1.09
SOX1O00570 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SOX1O00570 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SOX1O00570 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SOX1O00570 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.88■■□□□ 1.09
SOX1O00570 TSPY14P-201ENST00000303979 915 ntBASIC21.88■■□□□ 1.09
SOX1O00570 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SOX1O00570 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SOX1O00570 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SOX1O00570 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.88■■□□□ 1.09
SOX1O00570 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.88■■□□□ 1.09
SOX1O00570 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SOX1O00570 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.88■■□□□ 1.09
SOX1O00570 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SOX1O00570 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SOX1O00570 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SOX1O00570 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SOX1O00570 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SOX1O00570 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SOX1O00570 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SOX1O00570 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.87■■□□□ 1.09
SOX1O00570 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.87■■□□□ 1.09
SOX1O00570 FAM207BP-201ENST00000447172 505 ntBASIC21.87■■□□□ 1.09
SOX1O00570 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.87■■□□□ 1.09
SOX1O00570 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.87■■□□□ 1.09
SOX1O00570 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.87■■□□□ 1.09
SOX1O00570 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.87■■□□□ 1.09
SOX1O00570 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SOX1O00570 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SOX1O00570 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.87■■□□□ 1.09
SOX1O00570 AC124283.5-201ENST00000624661 1809 ntBASIC21.87■■□□□ 1.09
SOX1O00570 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SOX1O00570 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.86■■□□□ 1.09
SOX1O00570 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.86■■□□□ 1.09
SOX1O00570 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SOX1O00570 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.86■■□□□ 1.09
SOX1O00570 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SOX1O00570 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SOX1O00570 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.86■■□□□ 1.09
SOX1O00570 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.86■■□□□ 1.09
SOX1O00570 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.86■■□□□ 1.09
SOX1O00570 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.86■■□□□ 1.09
SOX1O00570 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SOX1O00570 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SOX1O00570 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SOX1O00570 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.86■■□□□ 1.09
SOX1O00570 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.86■■□□□ 1.09
SOX1O00570 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SOX1O00570 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SOX1O00570 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.85■■□□□ 1.09
SOX1O00570 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.85■■□□□ 1.09
SOX1O00570 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SOX1O00570 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SOX1O00570 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SOX1O00570 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SOX1O00570 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms