Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.34■□□□□ 0.21
UPK2O00526 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.34■□□□□ 0.21
UPK2O00526 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK2O00526 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UPK2O00526 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
UPK2O00526 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK2O00526 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.34■□□□□ 0.21
UPK2O00526 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK2O00526 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.34■□□□□ 0.21
UPK2O00526 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
UPK2O00526 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK2O00526 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK2O00526 AC112907.3-201ENST00000577781 2400 ntBASIC16.34■□□□□ 0.21
UPK2O00526 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK2O00526 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK2O00526 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
UPK2O00526 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
UPK2O00526 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UPK2O00526 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
UPK2O00526 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
UPK2O00526 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
UPK2O00526 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.33■□□□□ 0.2
UPK2O00526 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK2O00526 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK2O00526 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.33■□□□□ 0.2
UPK2O00526 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK2O00526 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
UPK2O00526 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC16.33■□□□□ 0.2
UPK2O00526 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
UPK2O00526 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.33■□□□□ 0.2
UPK2O00526 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UPK2O00526 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.33■□□□□ 0.2
UPK2O00526 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK2O00526 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK2O00526 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK2O00526 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK2O00526 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UPK2O00526 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK2O00526 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK2O00526 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK2O00526 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK2O00526 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK2O00526 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UPK2O00526 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.32■□□□□ 0.2
UPK2O00526 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
UPK2O00526 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.32■□□□□ 0.2
UPK2O00526 KRT19P1-201ENST00000405746 1186 ntBASIC16.32■□□□□ 0.2
UPK2O00526 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK2O00526 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
UPK2O00526 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.32■□□□□ 0.2
UPK2O00526 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
UPK2O00526 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UPK2O00526 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.32■□□□□ 0.2
UPK2O00526 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.32■□□□□ 0.2
UPK2O00526 AC019069.1-201ENST00000610008 1333 ntBASIC16.32■□□□□ 0.2
UPK2O00526 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
UPK2O00526 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.31■□□□□ 0.2
UPK2O00526 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
UPK2O00526 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.31■□□□□ 0.2
UPK2O00526 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK2O00526 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK2O00526 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK2O00526 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK2O00526 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UPK2O00526 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK2O00526 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
UPK2O00526 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UPK2O00526 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.31■□□□□ 0.2
UPK2O00526 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.31■□□□□ 0.2
UPK2O00526 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.31■□□□□ 0.2
UPK2O00526 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.31■□□□□ 0.2
UPK2O00526 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.31■□□□□ 0.2
UPK2O00526 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.31■□□□□ 0.2
UPK2O00526 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.31■□□□□ 0.2
UPK2O00526 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.31■□□□□ 0.2
UPK2O00526 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.31■□□□□ 0.2
UPK2O00526 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK2O00526 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UPK2O00526 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.31■□□□□ 0.2
UPK2O00526 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.31■□□□□ 0.2
UPK2O00526 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UPK2O00526 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK2O00526 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
UPK2O00526 KRT8P36-201ENST00000489121 1440 ntBASIC16.3■□□□□ 0.2
UPK2O00526 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.3■□□□□ 0.2
UPK2O00526 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
UPK2O00526 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.3■□□□□ 0.2
UPK2O00526 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.3■□□□□ 0.2
UPK2O00526 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK2O00526 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK2O00526 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.3■□□□□ 0.2
UPK2O00526 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK2O00526 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.3■□□□□ 0.2
UPK2O00526 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.3■□□□□ 0.2
UPK2O00526 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.3■□□□□ 0.2
UPK2O00526 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.3■□□□□ 0.2
UPK2O00526 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK2O00526 AFG3L1P-217ENST00000557444 2447 ntBASIC16.3■□□□□ 0.2
UPK2O00526 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK2O00526 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms