Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDC7O00311 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDC7O00311 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDC7O00311 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDC7O00311 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CDC7O00311 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDC7O00311 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CDC7O00311 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20■□□□□ 0.79
CDC7O00311 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20■□□□□ 0.79
CDC7O00311 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20■□□□□ 0.79
CDC7O00311 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CDC7O00311 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDC7O00311 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20■□□□□ 0.79
CDC7O00311 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDC7O00311 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CDC7O00311 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDC7O00311 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDC7O00311 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC7O00311 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.99■□□□□ 0.79
CDC7O00311 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC7O00311 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC7O00311 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC7O00311 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
CDC7O00311 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.99■□□□□ 0.79
CDC7O00311 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.99■□□□□ 0.79
CDC7O00311 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CDC7O00311 MFSD11-216ENST00000590393 1141 ntBASIC19.99■□□□□ 0.79
CDC7O00311 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.99■□□□□ 0.79
CDC7O00311 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.99■□□□□ 0.79
CDC7O00311 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC7O00311 AC099778.1-201ENST00000568593 1911 ntBASIC19.99■□□□□ 0.79
CDC7O00311 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC7O00311 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.99■□□□□ 0.79
CDC7O00311 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CDC7O00311 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDC7O00311 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC7O00311 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.99■□□□□ 0.79
CDC7O00311 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC7O00311 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.98■□□□□ 0.79
CDC7O00311 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC7O00311 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
CDC7O00311 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC7O00311 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CDC7O00311 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CDC7O00311 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC7O00311 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC7O00311 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.98■□□□□ 0.79
CDC7O00311 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC7O00311 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC7O00311 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC7O00311 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
CDC7O00311 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDC7O00311 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDC7O00311 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDC7O00311 SMG8-203ENST00000578922 2178 ntBASIC19.97■□□□□ 0.79
CDC7O00311 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
CDC7O00311 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CDC7O00311 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDC7O00311 KRT8P36-201ENST00000489121 1440 ntBASIC19.97■□□□□ 0.79
CDC7O00311 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.97■□□□□ 0.79
CDC7O00311 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CDC7O00311 KRT18P11-201ENST00000435214 1283 ntBASIC19.97■□□□□ 0.79
CDC7O00311 AL162430.1-201ENST00000480705 870 ntBASIC19.97■□□□□ 0.79
CDC7O00311 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.97■□□□□ 0.79
CDC7O00311 AL591742.1-201ENST00000604433 565 ntBASIC19.97■□□□□ 0.79
CDC7O00311 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.97■□□□□ 0.79
CDC7O00311 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.97■□□□□ 0.79
CDC7O00311 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.97■□□□□ 0.79
CDC7O00311 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.97■□□□□ 0.79
CDC7O00311 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.97■□□□□ 0.79
CDC7O00311 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
CDC7O00311 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDC7O00311 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDC7O00311 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.97■□□□□ 0.79
CDC7O00311 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC7O00311 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC7O00311 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.96■□□□□ 0.79
CDC7O00311 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.96■□□□□ 0.79
CDC7O00311 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CDC7O00311 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDC7O00311 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
CDC7O00311 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC7O00311 AC016769.1-201ENST00000409132 1010 ntBASIC19.96■□□□□ 0.79
CDC7O00311 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.96■□□□□ 0.79
CDC7O00311 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.96■□□□□ 0.79
CDC7O00311 AC016405.3-201ENST00000607710 860 ntBASIC19.96■□□□□ 0.79
CDC7O00311 AC011767.1-201ENST00000617410 1153 ntBASIC19.96■□□□□ 0.79
CDC7O00311 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDC7O00311 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC7O00311 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDC7O00311 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.96■□□□□ 0.79
CDC7O00311 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC7O00311 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.96■□□□□ 0.79
CDC7O00311 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC7O00311 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.79
CDC7O00311 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC7O00311 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CDC7O00311 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC7O00311 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CDC7O00311 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms