Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC188H7C350 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC188H7C350 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
CCDC188H7C350 AC012414.1-201ENST00000556676 535 ntBASIC21.16■□□□□ 0.98
CCDC188H7C350 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
CCDC188H7C350 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC188H7C350 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC188H7C350 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC188H7C350 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC188H7C350 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC188H7C350 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC188H7C350 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC188H7C350 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC188H7C350 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC188H7C350 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC188H7C350 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCDC188H7C350 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC188H7C350 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC188H7C350 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC188H7C350 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.15■□□□□ 0.98
CCDC188H7C350 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.15■□□□□ 0.98
CCDC188H7C350 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC188H7C350 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC188H7C350 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC188H7C350 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCDC188H7C350 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC188H7C350 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCDC188H7C350 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC188H7C350 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC188H7C350 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC188H7C350 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC188H7C350 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC188H7C350 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC188H7C350 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC188H7C350 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC188H7C350 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.14■□□□□ 0.97
CCDC188H7C350 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC188H7C350 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CCDC188H7C350 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.97
CCDC188H7C350 TPRG1LP1-201ENST00000598702 760 ntBASIC21.14■□□□□ 0.97
CCDC188H7C350 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC188H7C350 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC188H7C350 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC188H7C350 TMEM179-206ENST00000616017 1645 ntBASIC21.14■□□□□ 0.97
CCDC188H7C350 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC188H7C350 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC188H7C350 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
CCDC188H7C350 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC188H7C350 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC188H7C350 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC188H7C350 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC188H7C350 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC188H7C350 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC188H7C350 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC188H7C350 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC188H7C350 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC188H7C350 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC188H7C350 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC188H7C350 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC188H7C350 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC188H7C350 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC188H7C350 AL020996.1-203ENST00000536896 2307 ntBASIC21.13■□□□□ 0.97
CCDC188H7C350 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC188H7C350 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC188H7C350 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC188H7C350 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC188H7C350 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC188H7C350 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC188H7C350 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC188H7C350 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
CCDC188H7C350 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC188H7C350 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CCDC188H7C350 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC188H7C350 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CCDC188H7C350 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC188H7C350 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.12■□□□□ 0.97
CCDC188H7C350 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.12■□□□□ 0.97
CCDC188H7C350 AC138907.5-202ENST00000569484 235 ntBASIC21.12■□□□□ 0.97
CCDC188H7C350 AC120498.10-201ENST00000621827 505 ntBASIC21.12■□□□□ 0.97
CCDC188H7C350 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC188H7C350 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC188H7C350 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC188H7C350 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CCDC188H7C350 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC188H7C350 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CCDC188H7C350 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC188H7C350 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
CCDC188H7C350 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC188H7C350 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC188H7C350 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC188H7C350 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC188H7C350 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC188H7C350 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC188H7C350 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC188H7C350 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC188H7C350 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC188H7C350 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.11■□□□□ 0.97
CCDC188H7C350 KRT87P-202ENST00000534226 1464 ntBASIC21.11■□□□□ 0.97
CCDC188H7C350 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC188H7C350 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms