Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 SLC7A5P2-201ENST00000553010 536 ntBASIC21.05■□□□□ 0.96
SRRM3A6NNA2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SRRM3A6NNA2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SRRM3A6NNA2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 PRORSD1P-201ENST00000295112 541 ntBASIC21.03■□□□□ 0.96
SRRM3A6NNA2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 RPS2P52-201ENST00000469610 820 ntBASIC21.03■□□□□ 0.96
SRRM3A6NNA2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 AP006294.2-201ENST00000641667 209 ntBASIC21.03■□□□□ 0.96
SRRM3A6NNA2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SRRM3A6NNA2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.02■□□□□ 0.96
SRRM3A6NNA2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRRM3A6NNA2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.02■□□□□ 0.96
SRRM3A6NNA2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRRM3A6NNA2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SRRM3A6NNA2 SLC29A4P1-201ENST00000398760 971 ntBASIC21.02■□□□□ 0.96
SRRM3A6NNA2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SRRM3A6NNA2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SRRM3A6NNA2 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SRRM3A6NNA2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.02■□□□□ 0.95
SRRM3A6NNA2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SRRM3A6NNA2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.01■□□□□ 0.95
SRRM3A6NNA2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRRM3A6NNA2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.01■□□□□ 0.95
SRRM3A6NNA2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRRM3A6NNA2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SRRM3A6NNA2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.01■□□□□ 0.95
SRRM3A6NNA2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRRM3A6NNA2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.01■□□□□ 0.95
SRRM3A6NNA2 AC010525.1-201ENST00000585559 441 ntBASIC21.01■□□□□ 0.95
SRRM3A6NNA2 SMUG1P1-201ENST00000590640 811 ntBASIC21.01■□□□□ 0.95
SRRM3A6NNA2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRRM3A6NNA2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SRRM3A6NNA2 OR7E47P-201ENST00000546390 1422 ntBASIC21.01■□□□□ 0.95
SRRM3A6NNA2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SRRM3A6NNA2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SRRM3A6NNA2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21■□□□□ 0.95
SRRM3A6NNA2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SRRM3A6NNA2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21■□□□□ 0.95
SRRM3A6NNA2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21■□□□□ 0.95
SRRM3A6NNA2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21■□□□□ 0.95
SRRM3A6NNA2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms