Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 TMEM179-206ENST00000616017 1645 ntBASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.38□□□□□ -0.11
TRBV27A0A0K0K1C4 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.37□□□□□ -0.11
TRBV27A0A0K0K1C4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV27A0A0K0K1C4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV27A0A0K0K1C4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV27A0A0K0K1C4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV27A0A0K0K1C4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV27A0A0K0K1C4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV27A0A0K0K1C4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.37□□□□□ -0.11
TRBV27A0A0K0K1C4 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.37□□□□□ -0.11
TRBV27A0A0K0K1C4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.37□□□□□ -0.11
TRBV27A0A0K0K1C4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.37□□□□□ -0.11
TRBV27A0A0K0K1C4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV27A0A0K0K1C4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV27A0A0K0K1C4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV27A0A0K0K1C4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV27A0A0K0K1C4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV27A0A0K0K1C4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV27A0A0K0K1C4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV27A0A0K0K1C4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 AC245052.3-201ENST00000450182 901 ntBASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 AC131281.2-201ENST00000520478 145 ntBASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 RARRES2P11-201ENST00000635158 484 ntBASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV27A0A0K0K1C4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 AL356441.2-201ENST00000443009 864 ntBASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV27A0A0K0K1C4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 AC116050.2-201ENST00000612102 1779 ntBASIC14.34□□□□□ -0.11
TRBV27A0A0K0K1C4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms