Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV12-3A0A0B4J271 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV12-3A0A0B4J271 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV12-3A0A0B4J271 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TRAV12-3A0A0B4J271 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
TRAV12-3A0A0B4J271 AC004854.2-201ENST00000608450 1441 ntBASIC15.12■□□□□ 0.01
TRAV12-3A0A0B4J271 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV12-3A0A0B4J271 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV12-3A0A0B4J271 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.12■□□□□ 0.01
TRAV12-3A0A0B4J271 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV12-3A0A0B4J271 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV12-3A0A0B4J271 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.12■□□□□ 0.01
TRAV12-3A0A0B4J271 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV12-3A0A0B4J271 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAV12-3A0A0B4J271 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV12-3A0A0B4J271 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV12-3A0A0B4J271 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV12-3A0A0B4J271 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TRAV12-3A0A0B4J271 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV12-3A0A0B4J271 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV12-3A0A0B4J271 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV12-3A0A0B4J271 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 AC116050.2-201ENST00000612102 1779 ntBASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV12-3A0A0B4J271 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV12-3A0A0B4J271 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 KRT18P20-201ENST00000548986 1279 ntBASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAV12-3A0A0B4J271 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms