Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV8-2A0A0B4J237 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
TRAV8-2A0A0B4J237 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV8-2A0A0B4J237 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV8-2A0A0B4J237 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV8-2A0A0B4J237 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV8-2A0A0B4J237 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV8-2A0A0B4J237 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV8-2A0A0B4J237 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 AC116050.2-201ENST00000612102 1779 ntBASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 ZNRF2P3-201ENST00000424200 374 ntBASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV8-2A0A0B4J237 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 KRT18P20-201ENST00000548986 1279 ntBASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV8-2A0A0B4J237 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 MIR2861-201ENST00000636310 90 ntBASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 AC092720.2-201ENST00000602388 1665 ntBASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRAV8-2A0A0B4J237 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-2A0A0B4J237 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-2A0A0B4J237 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
TRAV8-2A0A0B4J237 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-2A0A0B4J237 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-2A0A0B4J237 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-2A0A0B4J237 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-2A0A0B4J237 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-2A0A0B4J237 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-2A0A0B4J237 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRAV8-2A0A0B4J237 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-2A0A0B4J237 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAV8-2A0A0B4J237 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms