Protein–RNA interactions for Protein: A0A087WSZ0

IGKV1D-8, Immunoglobulin kappa variable 1D-8, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-8A0A087WSZ0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
IGKV1D-8A0A087WSZ0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.04■□□□□ 0.32
IGKV1D-8A0A087WSZ0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 AC245052.3-201ENST00000450182 901 ntBASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 AL354811.1-201ENST00000610286 706 ntBASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 KRT16P2-201ENST00000414673 1423 ntBASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.03■□□□□ 0.32
IGKV1D-8A0A087WSZ0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IGKV1D-8A0A087WSZ0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IGKV1D-8A0A087WSZ0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IGKV1D-8A0A087WSZ0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.02■□□□□ 0.32
IGKV1D-8A0A087WSZ0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IGKV1D-8A0A087WSZ0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
IGKV1D-8A0A087WSZ0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.02■□□□□ 0.32
IGKV1D-8A0A087WSZ0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IGKV1D-8A0A087WSZ0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IGKV1D-8A0A087WSZ0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.02■□□□□ 0.32
IGKV1D-8A0A087WSZ0 AC138907.5-202ENST00000569484 235 ntBASIC17.02■□□□□ 0.32
IGKV1D-8A0A087WSZ0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.02■□□□□ 0.32
IGKV1D-8A0A087WSZ0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
IGKV1D-8A0A087WSZ0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.02■□□□□ 0.32
IGKV1D-8A0A087WSZ0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.02■□□□□ 0.31
IGKV1D-8A0A087WSZ0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.02■□□□□ 0.31
IGKV1D-8A0A087WSZ0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IGKV1D-8A0A087WSZ0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
IGKV1D-8A0A087WSZ0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IGKV1D-8A0A087WSZ0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
IGKV1D-8A0A087WSZ0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.02■□□□□ 0.31
IGKV1D-8A0A087WSZ0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IGKV1D-8A0A087WSZ0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
IGKV1D-8A0A087WSZ0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.02■□□□□ 0.31
IGKV1D-8A0A087WSZ0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 AC116050.2-201ENST00000612102 1779 ntBASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
IGKV1D-8A0A087WSZ0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-8A0A087WSZ0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-8A0A087WSZ0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
IGKV1D-8A0A087WSZ0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17■□□□□ 0.31
IGKV1D-8A0A087WSZ0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-8A0A087WSZ0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-8A0A087WSZ0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
IGKV1D-8A0A087WSZ0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17■□□□□ 0.31
IGKV1D-8A0A087WSZ0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-8A0A087WSZ0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-8A0A087WSZ0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17■□□□□ 0.31
IGKV1D-8A0A087WSZ0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
IGKV1D-8A0A087WSZ0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-8A0A087WSZ0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-8A0A087WSZ0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-8A0A087WSZ0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-8A0A087WSZ0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
IGKV1D-8A0A087WSZ0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-8A0A087WSZ0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-8A0A087WSZ0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
IGKV1D-8A0A087WSZ0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
IGKV1D-8A0A087WSZ0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IGKV1D-8A0A087WSZ0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IGKV1D-8A0A087WSZ0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.99■□□□□ 0.31
IGKV1D-8A0A087WSZ0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms