Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
UBE4BO95155 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 RNA5SP145-201ENST00000363124 125 ntBASIC9.42□□□□□ -0.9
UBE4BO95155 MIR146B-201ENST00000365699 73 ntBASIC9.42□□□□□ -0.9
UBE4BO95155 PAGE5-202ENST00000374952 428 ntTSL 5 BASIC9.42□□□□□ -0.9
UBE4BO95155 FCAR-206ENST00000391724 762 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 LYG1-202ENST00000409448 1038 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 AC009319.1-201ENST00000411493 754 ntBASIC9.42□□□□□ -0.9
UBE4BO95155 SLC8A1-AS1-203ENST00000418854 545 ntTSL 4 BASIC9.42□□□□□ -0.9
UBE4BO95155 AC104843.1-201ENST00000451203 319 ntBASIC9.42□□□□□ -0.9
UBE4BO95155 AC087501.2-201ENST00000466869 581 ntBASIC9.42□□□□□ -0.9
UBE4BO95155 RN7SL554P-201ENST00000468197 292 ntBASIC9.42□□□□□ -0.9
UBE4BO95155 AC002384.1-202ENST00000470135 673 ntTSL 5 BASIC9.42□□□□□ -0.9
UBE4BO95155 DNAJC19-205ENST00000479269 610 ntTSL 3 BASIC9.42□□□□□ -0.9
UBE4BO95155 SNCA-211ENST00000508895 905 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
UBE4BO95155 TPT1P5-201ENST00000511433 521 ntBASIC9.42□□□□□ -0.9
UBE4BO95155 AL158819.1-201ENST00000514681 398 ntBASIC9.42□□□□□ -0.9
UBE4BO95155 SLC5A4P1-201ENST00000532944 612 ntBASIC9.42□□□□□ -0.9
UBE4BO95155 AL392023.2-201ENST00000554687 785 ntTSL 4 BASIC9.42□□□□□ -0.9
UBE4BO95155 RN7SL279P-201ENST00000582185 284 ntBASIC9.42□□□□□ -0.9
UBE4BO95155 AC007952.7-201ENST00000583141 757 ntBASIC9.42□□□□□ -0.9
UBE4BO95155 RN7SL246P-201ENST00000584467 296 ntBASIC9.42□□□□□ -0.9
UBE4BO95155 SCML2P1-201ENST00000584511 1100 ntBASIC9.42□□□□□ -0.9
UBE4BO95155 ZNF780B-206ENST00000598845 401 ntTSL 3 BASIC9.42□□□□□ -0.9
UBE4BO95155 SNCA-212ENST00000611107 297 ntTSL 5 BASIC9.42□□□□□ -0.9
UBE4BO95155 AL355987.5-201ENST00000621585 411 ntBASIC9.42□□□□□ -0.9
UBE4BO95155 AC244517.9-201ENST00000624102 434 ntTSL 3 BASIC9.42□□□□□ -0.9
UBE4BO95155 KRT7-214ENST00000638501 398 ntTSL 5 BASIC9.42□□□□□ -0.9
UBE4BO95155 ZNF410-225ENST00000639051 936 ntTSL 5 BASIC9.42□□□□□ -0.9
UBE4BO95155 ZNF225-204ENST00000590612 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 TTF1-201ENST00000334270 3052 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 LY86-AS1-201ENST00000429345 1941 ntTSL 2 BASIC9.42□□□□□ -0.9
UBE4BO95155 AP001528.3-201ENST00000624364 3249 ntBASIC9.42□□□□□ -0.9
UBE4BO95155 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 TMEM136-204ENST00000529187 3930 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 SYNPR-201ENST00000295894 2607 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
UBE4BO95155 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 IKZF2-202ENST00000374319 2001 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 IST1-226ENST00000606369 3583 ntTSL 2 BASIC9.41□□□□□ -0.9
UBE4BO95155 CLDN8-201ENST00000399899 2068 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
UBE4BO95155 GINS4-209ENST00000523277 3873 ntTSL 5 BASIC9.41□□□□□ -0.9
UBE4BO95155 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE4BO95155 SERPINB8-202ENST00000353706 3387 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
UBE4BO95155 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC9.41□□□□□ -0.9
UBE4BO95155 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC9.41□□□□□ -0.9
UBE4BO95155 TMED6-201ENST00000288025 938 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE4BO95155 RN7SKP139-201ENST00000410411 293 ntBASIC9.41□□□□□ -0.9
UBE4BO95155 OR9I2P-201ENST00000427941 903 ntBASIC9.41□□□□□ -0.9
UBE4BO95155 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC9.41□□□□□ -0.9
UBE4BO95155 AC112907.1-201ENST00000434957 540 ntTSL 4 BASIC9.41□□□□□ -0.9
UBE4BO95155 RPL15P1-201ENST00000439981 600 ntBASIC9.41□□□□□ -0.9
UBE4BO95155 AL663058.1-201ENST00000453379 353 ntBASIC9.41□□□□□ -0.9
UBE4BO95155 AC010307.4-202ENST00000507403 389 ntTSL 3 BASIC9.41□□□□□ -0.9
UBE4BO95155 SPINK1-203ENST00000510027 1188 ntTSL 3 BASIC9.41□□□□□ -0.9
UBE4BO95155 AC112192.1-201ENST00000515086 553 ntTSL 4 BASIC9.41□□□□□ -0.9
UBE4BO95155 SETP16-201ENST00000531054 711 ntBASIC9.41□□□□□ -0.9
UBE4BO95155 AC117503.2-201ENST00000538837 321 ntTSL 3 BASIC9.41□□□□□ -0.9
UBE4BO95155 FLT1-205ENST00000543394 1275 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
UBE4BO95155 PCED1B-AS1-206ENST00000550426 683 ntTSL 5 BASIC9.41□□□□□ -0.9
UBE4BO95155 AC074032.1-202ENST00000552815 467 ntTSL 3 BASIC9.41□□□□□ -0.9
UBE4BO95155 PCED1B-AS1-211ENST00000552990 654 ntTSL 3 BASIC9.41□□□□□ -0.9
UBE4BO95155 LINC00929-205ENST00000557672 514 ntTSL 3 BASIC9.41□□□□□ -0.9
UBE4BO95155 ARPP19-209ENST00000567669 745 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
UBE4BO95155 LGALS17A-205ENST00000598736 1111 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
UBE4BO95155 ZNF880-206ENST00000600321 953 ntTSL 2 BASIC9.41□□□□□ -0.9
UBE4BO95155 ZSCAN30-210ENST00000601405 510 ntTSL 5 BASIC9.41□□□□□ -0.9
UBE4BO95155 RPL17P3-201ENST00000605695 525 ntBASIC9.41□□□□□ -0.9
UBE4BO95155 Metazoa_SRP.71-201ENST00000612122 282 ntBASIC9.41□□□□□ -0.9
UBE4BO95155 FLT1-208ENST00000617835 434 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
UBE4BO95155 Z99916.3-201ENST00000623422 1080 ntBASIC9.41□□□□□ -0.9
UBE4BO95155 SOX9-AS1-217ENST00000623935 1563 ntTSL 5 BASIC9.41□□□□□ -0.9
UBE4BO95155 TMEM213-203ENST00000442682 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE4BO95155 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE4BO95155 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE4BO95155 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE4BO95155 PQLC2L-203ENST00000449199 1484 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE4BO95155 GPN1-210ENST00000515877 1646 ntTSL 5 BASIC9.41□□□□□ -0.9
UBE4BO95155 FAM19A1-203ENST00000496687 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE4BO95155 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
UBE4BO95155 ZSCAN26-202ENST00000421553 2835 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE4BO95155 OR51D1-202ENST00000641817 3561 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
UBE4BO95155 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC9.41□□□□□ -0.9
UBE4BO95155 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
UBE4BO95155 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE4BO95155 ACTR6-201ENST00000188312 2464 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE4BO95155 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
UBE4BO95155 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
UBE4BO95155 AC006299.1-203ENST00000499625 2029 ntTSL 5 BASIC9.4□□□□□ -0.9
UBE4BO95155 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC9.4□□□□□ -0.9
UBE4BO95155 RNF214-204ENST00000530849 2846 ntTSL 5 BASIC9.4□□□□□ -0.9
UBE4BO95155 AC092894.1-201ENST00000486726 1563 ntTSL 5 BASIC9.4□□□□□ -0.9
UBE4BO95155 OR10G7-201ENST00000330487 936 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
UBE4BO95155 PSMD10-205ENST00000372295 779 ntTSL 5 BASIC9.4□□□□□ -0.9
UBE4BO95155 ARF1P1-201ENST00000406466 544 ntBASIC9.4□□□□□ -0.9
UBE4BO95155 RPL21P107-201ENST00000411449 460 ntBASIC9.4□□□□□ -0.9
UBE4BO95155 AC003075.1-208ENST00000415246 596 ntTSL 3 BASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms