Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CPEB1-AS1-202ENST00000618020 2994 ntBASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 ADH1C-204ENST00000515683 1740 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 PNMA8A-202ENST00000438932 3335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 LINC02239-201ENST00000504339 2290 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 FAM111A-202ENST00000420244 3780 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 FXYD1-201ENST00000351325 592 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 PSMD10-205ENST00000372295 779 ntTSL 5 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 LDHAP4-201ENST00000397561 998 ntBASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AL133406.1-201ENST00000404904 747 ntBASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AL136981.1-201ENST00000411450 549 ntTSL 4 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 LINC00316-201ENST00000416722 455 ntTSL 2 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 TIMM8AP1-201ENST00000419283 295 ntBASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 RPS23P8-201ENST00000429775 330 ntBASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AC018638.4-201ENST00000465971 1150 ntBASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 RN7SL77P-201ENST00000473332 294 ntBASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 RN7SL538P-201ENST00000494227 304 ntBASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AC025465.1-201ENST00000503145 797 ntTSL 3 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 MICE-207ENST00000510438 1157 ntBASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AC106774.1-201ENST00000515105 321 ntBASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 TCEA1-204ENST00000518784 586 ntTSL 2 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 MED30-204ENST00000522839 476 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AC022217.3-201ENST00000523005 352 ntTSL 3 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AC002428.1-201ENST00000523722 771 ntTSL 3 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 FABP5P7-201ENST00000524732 405 ntBASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 ATM-209ENST00000526567 560 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AP001973.1-201ENST00000530177 572 ntTSL 4 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AC069208.1-206ENST00000538905 832 ntTSL 4 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 LINC02455-201ENST00000541881 496 ntTSL 3 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AP000820.1-201ENST00000545912 506 ntTSL 3 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 COX5AP2-201ENST00000554418 394 ntBASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AL137230.2-201ENST00000555070 452 ntTSL 3 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AC027763.2-201ENST00000573755 539 ntTSL 4 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AC133065.3-201ENST00000577174 1161 ntBASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AC011474.3-201ENST00000587520 250 ntTSL 5 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AC108704.1-201ENST00000611714 744 ntBASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 uc_338.2-201ENST00000612963 182 ntBASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AC024559.2-202ENST00000615240 529 ntTSL 5 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AC008957.2-201ENST00000618632 396 ntTSL 5 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 SEM1-223ENST00000623498 582 ntTSL 5 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AC105052.3-201ENST00000639209 1130 ntTSL 5 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 PSG8-204ENST00000406636 1610 ntTSL 2 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 FGA-202ENST00000403106 2248 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 COG2-201ENST00000366668 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 IARS2P1-201ENST00000508226 3173 ntBASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 ELP3-210ENST00000521015 3158 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AC104574.2-201ENST00000559783 1985 ntTSL 3 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 GSPT1-206ENST00000563468 1962 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 TNFRSF10D-201ENST00000312584 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 PPM1A-201ENST00000325642 1713 ntTSL 2 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 TBXAS1-209ENST00000455353 1435 ntTSL 2 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 AL049840.1-201ENST00000498989 1404 ntTSL 4 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 NPC2-203ENST00000541064 1436 ntTSL 2 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 FLJ31356-202ENST00000445878 3001 ntTSL 4 BASIC7.95□□□□□ -1.14
NPIPA3F8WFD2 POLR2D-203ENST00000409955 1758 ntTSL 2 BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 SIAH1-201ENST00000356721 2415 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 STXBP5L-206ENST00000492541 3114 ntTSL 5 BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 AP005060.1-201ENST00000623868 3174 ntBASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 AC011330.1-201ENST00000510070 3235 ntBASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 AL445665.1-201ENST00000322495 2599 ntTSL 2 BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 KLHL32-205ENST00000539200 3600 ntTSL 2 BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 RGS4-204ENST00000421743 3311 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 AC128688.2-201ENST00000563632 1937 ntBASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 LINC01588-217ENST00000635379 1595 ntTSL 5 BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 FAM193A-203ENST00000502458 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 MTF2-201ENST00000370298 4125 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 ADGRF4-202ENST00000327753 3074 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 TAAR2-201ENST00000275191 1157 ntAPPRIS P3 BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 AIG1-201ENST00000275235 1202 ntTSL 2 BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 OR52K1-201ENST00000307632 1030 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 OR2D3-201ENST00000317834 1070 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 POLR2K-201ENST00000353107 998 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 HMGB1P39-201ENST00000366304 880 ntBASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 LINC00970-201ENST00000366408 1129 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 MAGOH-201ENST00000371466 500 ntTSL 2 BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 GCG-201ENST00000375497 799 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 SEM1-203ENST00000413065 661 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 CFL1P7-201ENST00000424759 486 ntBASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 RPL36P2-201ENST00000426026 315 ntBASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 AC244205.2-201ENST00000434790 898 ntTSL 5 BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 PRSS37-203ENST00000438520 826 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 AP1B1P1-202ENST00000448124 191 ntBASIC7.94□□□□□ -1.14
NPIPA3F8WFD2 AC119424.1-201ENST00000472513 350 ntTSL 5 BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms