Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
SNX18Q96RF0 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 SLC24A2-201ENST00000286344 2170 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 FAM122B-206ENST00000486347 1381 ntAPPRIS P3 TSL 2 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 AL353132.1-201ENST00000415260 2043 ntBASIC7.98□□□□□ -1.13
SNX18Q96RF0 NR3C2-208ENST00000512865 3822 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 CNDP1-203ENST00000582365 4111 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 HSD17B7-201ENST00000254521 1190 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 CRIP3-201ENST00000274990 800 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 SPRR3-201ENST00000295367 878 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 OFCC1-201ENST00000316020 863 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 RNA5SP349-201ENST00000363743 109 ntBASIC7.98□□□□□ -1.13
SNX18Q96RF0 ST3GAL3-214ENST00000372366 670 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 SNORA74B-201ENST00000391100 201 ntBASIC7.98□□□□□ -1.13
SNX18Q96RF0 AL137784.1-201ENST00000407121 745 ntBASIC7.98□□□□□ -1.13
SNX18Q96RF0 BX005214.2-201ENST00000423499 1077 ntTSL 5 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 AC005588.1-201ENST00000439168 162 ntBASIC7.98□□□□□ -1.13
SNX18Q96RF0 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 NBPF2P-201ENST00000453025 661 ntBASIC7.98□□□□□ -1.13
SNX18Q96RF0 UGT1A11P-201ENST00000456635 849 ntBASIC7.98□□□□□ -1.13
SNX18Q96RF0 DNAJC9-AS1-202ENST00000457147 762 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 RN7SL538P-201ENST00000494227 304 ntBASIC7.98□□□□□ -1.13
SNX18Q96RF0 BLNK-209ENST00000495266 440 ntTSL 5 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 NREP-219ENST00000509979 771 ntTSL 4 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 NMNAT3-214ENST00000514703 584 ntTSL 5 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 AC117372.1-201ENST00000548633 620 ntBASIC7.98□□□□□ -1.13
SNX18Q96RF0 PCBP2-213ENST00000548933 1202 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 LINC02314-201ENST00000555725 516 ntTSL 2 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 OR11K1P-201ENST00000558299 904 ntBASIC7.98□□□□□ -1.13
SNX18Q96RF0 TEX26-AS1-217ENST00000593246 797 ntTSL 5 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 RN7SL726P-201ENST00000605957 299 ntBASIC7.98□□□□□ -1.13
SNX18Q96RF0 OFCC1-217ENST00000611763 875 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 Metazoa_SRP.159-201ENST00000612585 265 ntBASIC7.98□□□□□ -1.13
SNX18Q96RF0 SLC6A2-206ENST00000567238 3160 ntTSL 2 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 DCX-201ENST00000356220 3019 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 SERPINA9-203ENST00000380365 1333 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 AC009403.2-202ENST00000636307 3956 ntTSL 5 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 OR4K1-202ENST00000641172 1339 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 DCAF8-203ENST00000368074 3824 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 PRAMEF10-201ENST00000235347 1525 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 PDLIM5-222ENST00000615540 6219 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 FAM120B-201ENST00000476287 5155 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
SNX18Q96RF0 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
SNX18Q96RF0 LAMA3-207ENST00000587184 5007 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 CLSTN2-AS1-201ENST00000513309 2693 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 RPE-216ENST00000454822 2130 ntTSL 2 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 PHF2P2-202ENST00000444553 2865 ntBASIC7.97□□□□□ -1.13
SNX18Q96RF0 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 AC009948.3-201ENST00000603415 1798 ntBASIC7.97□□□□□ -1.13
SNX18Q96RF0 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 C2orf42-205ENST00000420306 2193 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 KIF4B-201ENST00000435029 4378 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 EMC4-202ENST00000267750 1036 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 PTH-201ENST00000282091 813 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 SAMD3-201ENST00000324172 993 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 UBE2D3-205ENST00000350435 711 ntTSL 2 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 LCN1P1-201ENST00000372031 505 ntBASIC7.97□□□□□ -1.13
SNX18Q96RF0 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 RNU4-86P-201ENST00000410135 219 ntBASIC7.97□□□□□ -1.13
SNX18Q96RF0 LINC00525-201ENST00000412730 1188 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
SNX18Q96RF0 RPS5P2-201ENST00000415238 640 ntBASIC7.97□□□□□ -1.13
SNX18Q96RF0 KRT18P12-201ENST00000425245 1273 ntBASIC7.97□□□□□ -1.13
SNX18Q96RF0 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 APOPT1-206ENST00000476323 757 ntTSL 5 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 AL672142.1-201ENST00000482796 378 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 IGKV1D-16-201ENST00000492446 378 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
SNX18Q96RF0 HSPD1P18-201ENST00000504252 244 ntBASIC7.97□□□□□ -1.13
SNX18Q96RF0 C4orf22-205ENST00000508675 753 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms