Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 AC084879.1-201ENST00000636165 1201 ntBASIC9.44□□□□□ -0.9
UBE4BO95155 AC073065.1-201ENST00000411678 2866 ntBASIC9.44□□□□□ -0.9
UBE4BO95155 CREBRF-205ENST00000522692 2466 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
UBE4BO95155 MAPK10-301ENST00000641313 2482 ntBASIC9.44□□□□□ -0.9
UBE4BO95155 AL162632.3-201ENST00000566976 1625 ntBASIC9.44□□□□□ -0.9
UBE4BO95155 ADAM21P1-201ENST00000529267 2170 ntBASIC9.44□□□□□ -0.9
UBE4BO95155 IBSP-201ENST00000226284 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
UBE4BO95155 LRRC49-203ENST00000443425 3085 ntTSL 2 BASIC9.44□□□□□ -0.9
UBE4BO95155 NVL-202ENST00000340871 2431 ntTSL 2 BASIC9.44□□□□□ -0.9
UBE4BO95155 SERPINB6-205ENST00000380539 1338 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
UBE4BO95155 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 ZNF195-203ENST00000343338 3145 ntAPPRIS ALT2 TSL 4 BASIC9.43□□□□□ -0.9
UBE4BO95155 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 DNAJC5G-204ENST00000406962 1562 ntTSL 5 BASIC9.43□□□□□ -0.9
UBE4BO95155 CSTF3-AS1-201ENST00000500025 2031 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 SPDYE9P-202ENST00000571071 2024 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 SPDYE11-203ENST00000573748 2024 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 DPF3-203ENST00000541685 4077 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 RBMS2-204ENST00000550726 1452 ntTSL 2 BASIC9.43□□□□□ -0.9
UBE4BO95155 AC012360.3-201ENST00000610036 3449 ntBASIC9.43□□□□□ -0.9
UBE4BO95155 AC016582.1-201ENST00000592640 1716 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 IL37-201ENST00000263326 772 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 MSR1-203ENST00000355282 1167 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 RN7SKP239-201ENST00000364814 295 ntBASIC9.43□□□□□ -0.9
UBE4BO95155 MRPL47-202ENST00000392659 673 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 RNA5SP221-201ENST00000411271 103 ntBASIC9.43□□□□□ -0.9
UBE4BO95155 SNHG26-202ENST00000422542 1106 ntTSL 3 BASIC9.43□□□□□ -0.9
UBE4BO95155 AC244034.1-201ENST00000428027 792 ntBASIC9.43□□□□□ -0.9
UBE4BO95155 PIGCP2-201ENST00000433617 835 ntBASIC9.43□□□□□ -0.9
UBE4BO95155 LINC02093-201ENST00000440522 485 ntTSL 5 BASIC9.43□□□□□ -0.9
UBE4BO95155 MTND6P15-201ENST00000441157 521 ntBASIC9.43□□□□□ -0.9
UBE4BO95155 AC242426.2-201ENST00000446956 795 ntBASIC9.43□□□□□ -0.9
UBE4BO95155 PGM5P4-AS1-204ENST00000450636 537 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 AC069213.3-201ENST00000454858 474 ntBASIC9.43□□□□□ -0.9
UBE4BO95155 AC139451.1-201ENST00000463176 330 ntBASIC9.43□□□□□ -0.9
UBE4BO95155 RN7SL573P-201ENST00000485340 276 ntBASIC9.43□□□□□ -0.9
UBE4BO95155 LINC02373-201ENST00000549261 423 ntTSL 3 BASIC9.43□□□□□ -0.9
UBE4BO95155 MPPE1P1-201ENST00000557286 1076 ntBASIC9.43□□□□□ -0.9
UBE4BO95155 AC020892.2-201ENST00000557891 387 ntTSL 3 BASIC9.43□□□□□ -0.9
UBE4BO95155 AC036108.1-201ENST00000559468 588 ntTSL 4 BASIC9.43□□□□□ -0.9
UBE4BO95155 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 AC090079.1-201ENST00000572092 1183 ntBASIC9.43□□□□□ -0.9
UBE4BO95155 AA06-201ENST00000579745 632 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 AC026150.3-201ENST00000602595 499 ntBASIC9.43□□□□□ -0.9
UBE4BO95155 AC007161.2-201ENST00000604734 1109 ntBASIC9.43□□□□□ -0.9
UBE4BO95155 AC023983.2-201ENST00000608010 562 ntBASIC9.43□□□□□ -0.9
UBE4BO95155 PDZK1P1-203ENST00000616036 577 ntTSL 4 BASIC9.43□□□□□ -0.9
UBE4BO95155 GZMB-209ENST00000616551 559 ntTSL 2 BASIC9.43□□□□□ -0.9
UBE4BO95155 AC073254.1-206ENST00000617813 907 ntTSL 5 BASIC9.43□□□□□ -0.9
UBE4BO95155 PPFIA2-204ENST00000541017 4192 ntTSL 2 BASIC9.43□□□□□ -0.9
UBE4BO95155 VIT-208ENST00000497382 2650 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 PACRG-203ENST00000366889 1503 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
UBE4BO95155 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 STEAP3-AS1-201ENST00000454260 3218 ntTSL 2 BASIC9.43□□□□□ -0.9
UBE4BO95155 HNRNPC-222ENST00000555914 1658 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
UBE4BO95155 USP17L26-202ENST00000610514 1677 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
UBE4BO95155 USP17L20-202ENST00000613757 1677 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
UBE4BO95155 USP17L11-202ENST00000613973 1677 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
UBE4BO95155 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
UBE4BO95155 USP17L19-202ENST00000615989 1677 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
UBE4BO95155 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
UBE4BO95155 USP17L18-202ENST00000619296 1677 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
UBE4BO95155 USP17L25-202ENST00000621472 1677 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
UBE4BO95155 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
UBE4BO95155 USP17L24-202ENST00000622713 1677 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
UBE4BO95155 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 MYH2-204ENST00000532183 2528 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 PCBP2-222ENST00000552296 1342 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
UBE4BO95155 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC9.43□□□□□ -0.9
UBE4BO95155 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE4BO95155 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC9.42□□□□□ -0.9
UBE4BO95155 RPGR-202ENST00000339363 3686 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
UBE4BO95155 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
UBE4BO95155 USP3-208ENST00000558285 1742 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 NOS1-203ENST00000344089 4340 ntTSL 5 BASIC9.42□□□□□ -0.9
UBE4BO95155 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
UBE4BO95155 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 RXFP2-202ENST00000380314 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 IDI2-201ENST00000277517 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 AC008543.2-201ENST00000436907 1383 ntBASIC9.42□□□□□ -0.9
UBE4BO95155 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC9.42□□□□□ -0.9
UBE4BO95155 LOXHD1-211ENST00000579038 3632 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 AC132825.4-201ENST00000582527 3644 ntBASIC9.42□□□□□ -0.9
UBE4BO95155 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 CEP68-205ENST00000537589 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 ARHGEF9-201ENST00000253401 5413 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 MIPOL1-211ENST00000556451 2282 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
UBE4BO95155 UBR5-AS1-201ENST00000499653 2048 ntTSL 2 BASIC9.42□□□□□ -0.9
UBE4BO95155 LINC00558-201ENST00000569422 3163 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms