Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 ASS1P8-201ENST00000504437 647 ntBASIC9.48□□□□□ -0.89
UBE4BO95155 LINC02505-201ENST00000505298 788 ntTSL 5 BASIC9.48□□□□□ -0.89
UBE4BO95155 AC093835.1-201ENST00000508072 568 ntTSL 4 BASIC9.48□□□□□ -0.89
UBE4BO95155 AP000757.1-202ENST00000525260 891 ntTSL 3 BASIC9.48□□□□□ -0.89
UBE4BO95155 AP002469.1-201ENST00000526011 1043 ntBASIC9.48□□□□□ -0.89
UBE4BO95155 Metazoa_SRP.11-201ENST00000537819 269 ntBASIC9.48□□□□□ -0.89
UBE4BO95155 AP000820.1-201ENST00000545912 506 ntTSL 3 BASIC9.48□□□□□ -0.89
UBE4BO95155 RPL41-204ENST00000546591 699 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE4BO95155 AL357153.2-201ENST00000556646 565 ntTSL 4 BASIC9.48□□□□□ -0.89
UBE4BO95155 LINC01927-201ENST00000582231 712 ntTSL 3 BASIC9.48□□□□□ -0.89
UBE4BO95155 SUZ12P1-207ENST00000583950 741 ntTSL 5 BASIC9.48□□□□□ -0.89
UBE4BO95155 CPSF7-226ENST00000626926 306 ntTSL 5 BASIC9.48□□□□□ -0.89
UBE4BO95155 LIAS-210ENST00000638451 1159 ntTSL 5 BASIC9.48□□□□□ -0.89
UBE4BO95155 AC092329.4-206ENST00000640517 561 ntTSL 4 BASIC9.48□□□□□ -0.89
UBE4BO95155 TRIM43-201ENST00000272395 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE4BO95155 C3P1-202ENST00000497718 4954 ntBASIC9.48□□□□□ -0.89
UBE4BO95155 TBCCD1-205ENST00000446782 2186 ntTSL 2 BASIC9.48□□□□□ -0.89
UBE4BO95155 SMARCA2-202ENST00000324954 1781 ntTSL 5 BASIC9.48□□□□□ -0.89
UBE4BO95155 FGG-203ENST00000404648 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE4BO95155 ZNF728-201ENST00000594710 2015 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
UBE4BO95155 SH3D19-204ENST00000427414 2656 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE4BO95155 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE4BO95155 MCM8-203ENST00000378886 3835 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBE4BO95155 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC9.47□□□□□ -0.89
UBE4BO95155 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 HAUS2-201ENST00000260372 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 AC078881.1-201ENST00000507023 2161 ntTSL 2 BASIC9.47□□□□□ -0.89
UBE4BO95155 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
UBE4BO95155 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC9.47□□□□□ -0.89
UBE4BO95155 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC9.47□□□□□ -0.89
UBE4BO95155 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 IL15-203ENST00000394159 1545 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 CHI3L2-204ENST00000466741 1518 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 TPH2-201ENST00000333850 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 LCN1-201ENST00000263598 776 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 BPIFA1-201ENST00000354297 1079 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 SMIM7-201ENST00000358726 850 ntTSL 2 BASIC9.47□□□□□ -0.89
UBE4BO95155 RNA5SP141-201ENST00000364543 120 ntBASIC9.47□□□□□ -0.89
UBE4BO95155 GSTA4-202ENST00000370960 859 ntTSL 3 BASIC9.47□□□□□ -0.89
UBE4BO95155 AL122008.2-201ENST00000412915 570 ntBASIC9.47□□□□□ -0.89
UBE4BO95155 DHRS9-203ENST00000421653 1044 ntTSL 5 BASIC9.47□□□□□ -0.89
UBE4BO95155 AL683807.1-201ENST00000427886 445 ntTSL 2 BASIC9.47□□□□□ -0.89
UBE4BO95155 Z83838.1-201ENST00000431036 925 ntBASIC9.47□□□□□ -0.89
UBE4BO95155 LYZL4-202ENST00000441172 838 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
UBE4BO95155 FAR2P3-205ENST00000447059 604 ntBASIC9.47□□□□□ -0.89
UBE4BO95155 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC9.47□□□□□ -0.89
UBE4BO95155 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC9.47□□□□□ -0.89
UBE4BO95155 AC110994.1-201ENST00000468519 406 ntBASIC9.47□□□□□ -0.89
UBE4BO95155 AC006153.1-201ENST00000480135 371 ntTSL 3 BASIC9.47□□□□□ -0.89
UBE4BO95155 PDCD10-218ENST00000497056 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 AC098679.2-201ENST00000513067 365 ntTSL 2 BASIC9.47□□□□□ -0.89
UBE4BO95155 AL110292.1-202ENST00000552303 568 ntTSL 4 BASIC9.47□□□□□ -0.89
UBE4BO95155 AC013452.1-201ENST00000560630 598 ntBASIC9.47□□□□□ -0.89
UBE4BO95155 TP53TG3HP-201ENST00000563487 346 ntBASIC9.47□□□□□ -0.89
UBE4BO95155 RPL17-212ENST00000581373 584 ntTSL 2 BASIC9.47□□□□□ -0.89
UBE4BO95155 AC090213.1-201ENST00000586841 546 ntTSL 4 BASIC9.47□□□□□ -0.89
UBE4BO95155 PSG10P-202ENST00000597171 1283 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 AC090950.1-201ENST00000604625 830 ntBASIC9.47□□□□□ -0.89
UBE4BO95155 KCNQ1OT1_2.1-201ENST00000619507 196 ntBASIC9.47□□□□□ -0.89
UBE4BO95155 AL136038.5-201ENST00000620835 554 ntBASIC9.47□□□□□ -0.89
UBE4BO95155 RFPL3S-206ENST00000621921 433 ntBASIC9.47□□□□□ -0.89
UBE4BO95155 AC010894.5-201ENST00000624428 951 ntBASIC9.47□□□□□ -0.89
UBE4BO95155 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 MAP3K19-202ENST00000375844 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 AC079316.2-201ENST00000623545 1375 ntBASIC9.47□□□□□ -0.89
UBE4BO95155 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 OR2T10-202ENST00000642090 3519 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
UBE4BO95155 EPB41L2-221ENST00000529208 3023 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
UBE4BO95155 MLANA-203ENST00000381477 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBE4BO95155 RBMS1-204ENST00000409289 1490 ntTSL 5 BASIC9.47□□□□□ -0.89
UBE4BO95155 AC092279.2-201ENST00000623742 2189 ntBASIC9.47□□□□□ -0.89
UBE4BO95155 GFRAL-201ENST00000340465 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
UBE4BO95155 AC013444.1-201ENST00000428909 1904 ntBASIC9.46□□□□□ -0.89
UBE4BO95155 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC9.46□□□□□ -0.89
UBE4BO95155 ERMAP-203ENST00000372517 3423 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
UBE4BO95155 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
UBE4BO95155 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
UBE4BO95155 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
UBE4BO95155 BCO2-201ENST00000357685 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
UBE4BO95155 URM1-202ENST00000372850 3045 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
UBE4BO95155 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC9.46□□□□□ -0.89
UBE4BO95155 MYRFL-205ENST00000552032 3139 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
UBE4BO95155 HKR1-202ENST00000392153 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
UBE4BO95155 AMBN-202ENST00000449493 1512 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
UBE4BO95155 HAUS6-201ENST00000380496 3756 ntTSL 2 BASIC9.46□□□□□ -0.89
UBE4BO95155 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
UBE4BO95155 FAM196A-202ENST00000522781 4403 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
UBE4BO95155 SCGB1D2-201ENST00000244926 480 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
UBE4BO95155 AC016598.1-201ENST00000340585 560 ntTSL 4 BASIC9.46□□□□□ -0.9
UBE4BO95155 U3.18-201ENST00000390880 216 ntBASIC9.46□□□□□ -0.9
UBE4BO95155 NINJ2-202ENST00000397265 793 ntAPPRIS ALT2 TSL 3 BASIC9.46□□□□□ -0.9
UBE4BO95155 AL590286.1-201ENST00000404178 291 ntBASIC9.46□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms