Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC012467.2-201ENST00000607783 2583 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 ATXN7L1-201ENST00000318724 1470 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 NLRP3-204ENST00000366497 4318 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 FCHO2-201ENST00000287761 1287 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 ATP5I-201ENST00000304312 365 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 BPIFA1-201ENST00000354297 1079 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 MRPL55-216ENST00000366744 726 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 CLDN20-201ENST00000367165 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 TRAV8-6-201ENST00000390443 561 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 MAP3K7CL-205ENST00000399926 749 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 RAET1M-201ENST00000405282 596 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 AC073188.2-201ENST00000424036 701 ntTSL 5 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 TYROBP-202ENST00000424586 541 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 AL035250.1-201ENST00000424662 593 ntTSL 2 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 RPL10P5-201ENST00000427719 639 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 RPL12P15-201ENST00000433385 499 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 RPSAP17-201ENST00000437336 883 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 PRDX2P1-201ENST00000450181 589 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 HNRNPCP10-201ENST00000457130 884 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 AC004918.1-201ENST00000467537 770 ntTSL 2 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 AC119424.1-201ENST00000472513 350 ntTSL 5 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 RN7SL698P-201ENST00000480095 302 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 RN7SL291P-201ENST00000487916 289 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 AC022973.1-201ENST00000490340 575 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 RPARP-AS1-203ENST00000494270 711 ntTSL 2 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 AC022296.1-201ENST00000512176 682 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 RNU1-125P-201ENST00000516752 129 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 AC069287.2-201ENST00000526963 574 ntTSL 3 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 AC136443.2-201ENST00000528546 258 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 AP003064.2-201ENST00000528983 510 ntTSL 3 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 MOK-239ENST00000561150 568 ntTSL 4 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 AC136619.1-201ENST00000564015 258 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 HSP90AB2P-202ENST00000602906 1277 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 ACTG1P22-202ENST00000605503 859 ntTSL 4 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 CU633904.1-204ENST00000624907 777 ntTSL 3 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 BCAS3-233ENST00000626960 227 ntTSL 5 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 Metazoa_SRP.208-201ENST00000629083 297 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 GBAP1-202ENST00000459805 2922 ntTSL 5 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 ATF7IP-221ENST00000543189 4887 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 CCR9-203ENST00000395963 2512 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 LIG4-202ENST00000405925 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 ARMCX5-GPRASP2-206ENST00000476910 1848 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 SLC8A1-209ENST00000408028 2898 ntTSL 5 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 ZNF791-201ENST00000343325 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 AC025580.2-204ENST00000560077 2399 ntTSL 5 BASIC8.03□□□□□ -1.12
SNX18Q96RF0 AP001528.3-201ENST00000624364 3249 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 CTBP2P2-201ENST00000434549 1334 ntBASIC8.03□□□□□ -1.12
SNX18Q96RF0 LINC01992-201ENST00000567574 1340 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SNX18Q96RF0 SP4-201ENST00000222584 6126 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
SNX18Q96RF0 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
SNX18Q96RF0 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SNX18Q96RF0 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
SNX18Q96RF0 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SNX18Q96RF0 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SNX18Q96RF0 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SNX18Q96RF0 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SNX18Q96RF0 CNOT9-202ENST00000295701 1126 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SNX18Q96RF0 KRTAP22-1-201ENST00000334680 296 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
SNX18Q96RF0 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
SNX18Q96RF0 KIR2DL4-202ENST00000346587 1026 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SNX18Q96RF0 UBE2C-205ENST00000372568 914 ntTSL 2 BASIC8.02□□□□□ -1.13
SNX18Q96RF0 RAD51B-201ENST00000390683 922 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SNX18Q96RF0 CD160-203ENST00000401557 705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
SNX18Q96RF0 ZNF70P1-201ENST00000417480 624 ntBASIC8.02□□□□□ -1.13
SNX18Q96RF0 HLA-T-206ENST00000429813 450 ntBASIC8.02□□□□□ -1.13
SNX18Q96RF0 GSG1-204ENST00000432710 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
SNX18Q96RF0 Z83841.1-201ENST00000433173 968 ntBASIC8.02□□□□□ -1.13
SNX18Q96RF0 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
SNX18Q96RF0 AL513122.2-201ENST00000437135 838 ntTSL 3 BASIC8.02□□□□□ -1.13
SNX18Q96RF0 CD46P1-201ENST00000441364 763 ntBASIC8.02□□□□□ -1.13
SNX18Q96RF0 AC139451.1-201ENST00000463176 330 ntBASIC8.02□□□□□ -1.13
SNX18Q96RF0 RN7SL370P-201ENST00000470869 295 ntBASIC8.02□□□□□ -1.13
SNX18Q96RF0 AC130651.1-201ENST00000482912 598 ntBASIC8.02□□□□□ -1.13
SNX18Q96RF0 AC092807.3-202ENST00000498304 508 ntTSL 3 BASIC8.02□□□□□ -1.13
SNX18Q96RF0 LINC02505-201ENST00000505298 788 ntTSL 5 BASIC8.02□□□□□ -1.13
SNX18Q96RF0 AC107074.1-201ENST00000513617 764 ntTSL 3 BASIC8.02□□□□□ -1.13
SNX18Q96RF0 AC137549.1-201ENST00000514243 533 ntBASIC8.02□□□□□ -1.13
SNX18Q96RF0 RPS20-207ENST00000520627 423 ntTSL 5 BASIC8.02□□□□□ -1.13
SNX18Q96RF0 AC010319.1-201ENST00000526892 1258 ntBASIC8.02□□□□□ -1.13
SNX18Q96RF0 KCTD21-AS1-205ENST00000530261 910 ntTSL 4 BASIC8.02□□□□□ -1.13
SNX18Q96RF0 CRYAB-215ENST00000533971 981 ntTSL 2 BASIC8.02□□□□□ -1.13
SNX18Q96RF0 CCND2P1-201ENST00000539268 799 ntBASIC8.02□□□□□ -1.13
SNX18Q96RF0 NACA-204ENST00000546392 802 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
SNX18Q96RF0 OR4K4P-201ENST00000556991 684 ntBASIC8.02□□□□□ -1.13
SNX18Q96RF0 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms