Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 TMEM101-206ENST00000590905 573 ntTSL 512.41□□□□□ -0.422e-6■■□□□ 13.9
PRPF8Q6P2Q9 SELENOH-205ENST00000534386 1039 ntTSL 212.39□□□□□ -0.432e-6■■□□□ 13.9
PRPF8Q6P2Q9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.39□□□□□ -0.435e-6■■□□□ 13.9
PRPF8Q6P2Q9 DHX38-208ENST00000566489 574 ntTSL 412.38□□□□□ -0.432e-6■■□□□ 13.9
PRPF8Q6P2Q9 HMOX2-206ENST00000570445 877 ntTSL 212.23□□□□□ -0.456e-12■■□□□ 13.9
PRPF8Q6P2Q9 TMEM44-209ENST00000452358 846 ntTSL 312.17□□□□□ -0.462e-6■■□□□ 13.9
PRPF8Q6P2Q9 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.462e-6■■□□□ 13.9
PRPF8Q6P2Q9 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.12□□□□□ -0.472e-6■■□□□ 13.9
PRPF8Q6P2Q9 LPP-207ENST00000443217 400 ntTSL 312.08□□□□□ -0.482e-6■■□□□ 13.9
PRPF8Q6P2Q9 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.492e-6■■□□□ 13.9
PRPF8Q6P2Q9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC11.97□□□□□ -0.495e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC11.93□□□□□ -0.52e-6■■□□□ 13.9
PRPF8Q6P2Q9 PLEKHA7-201ENST00000332954 2192 ntTSL 1 (best)11.9□□□□□ -0.56e-12■■□□□ 13.9
PRPF8Q6P2Q9 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.9□□□□□ -0.512e-6■■□□□ 13.9
PRPF8Q6P2Q9 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC11.84□□□□□ -0.512e-6■■□□□ 13.9
PRPF8Q6P2Q9 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.525e-6■■□□□ 13.9
PRPF8Q6P2Q9 TMEM50A-205ENST00000491936 965 ntTSL 1 (best)11.71□□□□□ -0.542e-6■■□□□ 13.9
PRPF8Q6P2Q9 COMMD6-207ENST00000464050 790 ntTSL 311.65□□□□□ -0.542e-6■■□□□ 13.9
PRPF8Q6P2Q9 SCYL3-205ENST00000470238 1538 ntTSL 511.65□□□□□ -0.542e-6■■□□□ 13.9
PRPF8Q6P2Q9 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.552e-6■■□□□ 13.9
PRPF8Q6P2Q9 ELP2-209ENST00000536830 636 ntTSL 211.57□□□□□ -0.566e-12■■□□□ 13.9
PRPF8Q6P2Q9 AHNAK-204ENST00000528508 568 ntAPPRIS ALT2 TSL 411.54□□□□□ -0.562e-6■■□□□ 13.9
PRPF8Q6P2Q9 GDI1-201ENST00000415109 560 ntTSL 411.51□□□□□ -0.573e-9■■□□□ 13.9
PRPF8Q6P2Q9 AP002495.1-209ENST00000531488 541 ntTSL 211.46□□□□□ -0.572e-6■■□□□ 13.9
PRPF8Q6P2Q9 DBNDD1-204ENST00000568330 567 ntTSL 511.4□□□□□ -0.595e-6■■□□□ 13.9
PRPF8Q6P2Q9 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.596e-12■■□□□ 13.9
PRPF8Q6P2Q9 AHNAK-206ENST00000530285 580 ntAPPRIS ALT2 TSL 311.34□□□□□ -0.592e-6■■□□□ 13.9
PRPF8Q6P2Q9 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.32□□□□□ -0.63e-8■■□□□ 13.9
PRPF8Q6P2Q9 MKNK1-202ENST00000342571 2422 ntTSL 1 (best)11.26□□□□□ -0.616e-12■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.622e-6■■□□□ 13.9
PRPF8Q6P2Q9 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.642e-6■■□□□ 13.9
PRPF8Q6P2Q9 POLR3K-202ENST00000481810 907 ntTSL 211.06□□□□□ -0.643e-9■■□□□ 13.9
PRPF8Q6P2Q9 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.642e-6■■□□□ 13.9
PRPF8Q6P2Q9 DUS3L-214ENST00000592673 701 ntTSL 211.06□□□□□ -0.642e-6■■□□□ 13.9
PRPF8Q6P2Q9 SZT2-216ENST00000639852 1314 ntTSL 511.04□□□□□ -0.642e-6■■□□□ 13.9
PRPF8Q6P2Q9 HMOX2-211ENST00000574594 909 ntTSL 511.04□□□□□ -0.646e-12■■□□□ 13.9
PRPF8Q6P2Q9 HERC2-202ENST00000562136 632 ntTSL 211.03□□□□□ -0.642e-6■■□□□ 13.9
PRPF8Q6P2Q9 POLR3F-202ENST00000461589 605 ntTSL 211.01□□□□□ -0.652e-6■■□□□ 13.9
PRPF8Q6P2Q9 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC11□□□□□ -0.652e-6■■□□□ 13.9
PRPF8Q6P2Q9 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC11□□□□□ -0.656e-12■■□□□ 13.9
PRPF8Q6P2Q9 PTPN12-205ENST00000433369 552 ntTSL 510.89□□□□□ -0.676e-12■■□□□ 13.9
PRPF8Q6P2Q9 TMEM101-202ENST00000585950 682 ntTSL 310.87□□□□□ -0.672e-6■■□□□ 13.9
PRPF8Q6P2Q9 MACF1-223ENST00000496360 2080 ntTSL 210.86□□□□□ -0.672e-6■■□□□ 13.9
PRPF8Q6P2Q9 SUGP1-203ENST00000585444 532 ntTSL 410.86□□□□□ -0.672e-6■■□□□ 13.9
PRPF8Q6P2Q9 MCM4-206ENST00000519138 927 ntTSL 210.81□□□□□ -0.682e-6■■□□□ 13.9
PRPF8Q6P2Q9 TMCO3-208ENST00000491166 595 ntTSL 210.81□□□□□ -0.682e-6■■□□□ 13.9
PRPF8Q6P2Q9 GINS3-209ENST00000567909 210 ntTSL 310.74□□□□□ -0.692e-6■■□□□ 13.9
PRPF8Q6P2Q9 MIS18BP1-201ENST00000310806 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.76e-12■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC10.69□□□□□ -0.72e-6■■□□□ 13.9
PRPF8Q6P2Q9 CCDC117-203ENST00000432510 568 ntTSL 510.56□□□□□ -0.722e-6■■□□□ 13.9
PRPF8Q6P2Q9 MPI-208ENST00000563786 1707 ntTSL 5 BASIC10.55□□□□□ -0.723e-8■■□□□ 13.9
PRPF8Q6P2Q9 TMCO3-210ENST00000620021 3542 ntTSL 410.52□□□□□ -0.732e-6■■□□□ 13.9
PRPF8Q6P2Q9 CEP152-210ENST00000561245 577 ntTSL 210.5□□□□□ -0.732e-6■■□□□ 13.9
PRPF8Q6P2Q9 MPI-206ENST00000562800 407 ntTSL 310.48□□□□□ -0.733e-8■■□□□ 13.9
PRPF8Q6P2Q9 ENO3-216ENST00000522954 726 ntTSL 210.44□□□□□ -0.742e-6■■□□□ 13.9
PRPF8Q6P2Q9 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC10.43□□□□□ -0.746e-12■■□□□ 13.9
PRPF8Q6P2Q9 MPI-212ENST00000565576 1148 ntTSL 2 BASIC10.39□□□□□ -0.752e-6■■□□□ 13.9
PRPF8Q6P2Q9 RUNX1-213ENST00000469087 1790 ntTSL 1 (best)10.38□□□□□ -0.752e-6■■□□□ 13.9
PRPF8Q6P2Q9 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.752e-6■■□□□ 13.9
PRPF8Q6P2Q9 PPP1R26-203ENST00000602993 409 ntTSL 410.36□□□□□ -0.753e-9■■□□□ 13.9
PRPF8Q6P2Q9 FRMD8-204ENST00000525156 380 ntTSL 510.32□□□□□ -0.763e-9■■□□□ 13.9
PRPF8Q6P2Q9 KRTCAP2-204ENST00000471891 578 ntTSL 310.28□□□□□ -0.762e-6■■□□□ 13.9
PRPF8Q6P2Q9 FAM131A-211ENST00000639617 4450 ntTSL 5 BASIC10.25□□□□□ -0.772e-6■■□□□ 13.9
PRPF8Q6P2Q9 MPI-207ENST00000563422 1481 ntTSL 1 (best) BASIC10.22□□□□□ -0.773e-8■■□□□ 13.9
PRPF8Q6P2Q9 KRTCAP2-210ENST00000497317 477 ntTSL 39.93□□□□□ -0.822e-6■■□□□ 13.9
PRPF8Q6P2Q9 CLIP1-208ENST00000537004 2000 ntTSL 1 (best)9.91□□□□□ -0.822e-6■■□□□ 13.9
PRPF8Q6P2Q9 MPI-215ENST00000567116 586 ntTSL 29.89□□□□□ -0.832e-6■■□□□ 13.9
PRPF8Q6P2Q9 MPI-222ENST00000568907 537 ntTSL 49.89□□□□□ -0.832e-6■■□□□ 13.9
PRPF8Q6P2Q9 NAALAD2-202ENST00000375944 1149 ntTSL 1 (best) BASIC9.88□□□□□ -0.832e-6■■□□□ 13.9
PRPF8Q6P2Q9 MTMR3-210ENST00000491251 569 ntTSL 29.78□□□□□ -0.842e-6■■□□□ 13.9
PRPF8Q6P2Q9 KRTCAP2-209ENST00000492892 430 ntTSL 39.72□□□□□ -0.852e-6■■□□□ 13.9
PRPF8Q6P2Q9 PPP2R5C-224ENST00000556946 735 ntTSL 2 BASIC9.7□□□□□ -0.862e-6■■□□□ 13.9
PRPF8Q6P2Q9 NEK9-202ENST00000553823 577 ntTSL 59.68□□□□□ -0.862e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-220ENST00000461066 692 ntTSL 59.64□□□□□ -0.872e-6■■□□□ 13.9
PRPF8Q6P2Q9 TM9SF1-210ENST00000530563 721 ntTSL 39.64□□□□□ -0.872e-6■■□□□ 13.9
PRPF8Q6P2Q9 MKNK1-221ENST00000528237 540 ntTSL 49.59□□□□□ -0.876e-12■■□□□ 13.9
PRPF8Q6P2Q9 MAT2B-208ENST00000523606 3210 ntTSL 29.56□□□□□ -0.882e-6■■□□□ 13.9
PRPF8Q6P2Q9 ORC2-207ENST00000487853 919 ntTSL 39.54□□□□□ -0.883e-9■■□□□ 13.9
PRPF8Q6P2Q9 MPI-216ENST00000567132 559 ntTSL 49.51□□□□□ -0.892e-6■■□□□ 13.9
PRPF8Q6P2Q9 MKNK1-226ENST00000532110 494 ntTSL 49.48□□□□□ -0.896e-12■■□□□ 13.9
PRPF8Q6P2Q9 TM9SF1-207ENST00000528895 961 ntTSL 29.47□□□□□ -0.892e-6■■□□□ 13.9
PRPF8Q6P2Q9 HMOX2-203ENST00000406590 1727 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.96e-12■■□□□ 13.9
PRPF8Q6P2Q9 COMMD6-206ENST00000460675 463 ntTSL 29.34□□□□□ -0.912e-6■■□□□ 13.9
PRPF8Q6P2Q9 AP002495.1-204ENST00000529844 1781 ntTSL 2 BASIC9.27□□□□□ -0.932e-6■■□□□ 13.9
PRPF8Q6P2Q9 AP002495.1-202ENST00000528511 933 ntAPPRIS P5 TSL 5 BASIC9.27□□□□□ -0.932e-6■■□□□ 13.9
PRPF8Q6P2Q9 MPI-220ENST00000568828 578 ntTSL 49.26□□□□□ -0.932e-6■■□□□ 13.9
PRPF8Q6P2Q9 CDK3-204ENST00000588812 570 ntTSL 39.25□□□□□ -0.932e-6■■□□□ 13.9
PRPF8Q6P2Q9 HMOX2-212ENST00000575051 914 ntTSL 59.23□□□□□ -0.936e-12■■□□□ 13.9
PRPF8Q6P2Q9 AREL1-204ENST00000481010 874 ntTSL 59.23□□□□□ -0.932e-6■■□□□ 13.9
PRPF8Q6P2Q9 ST3GAL3-210ENST00000361746 1335 ntTSL 1 (best) BASIC9.2□□□□□ -0.942e-6■■□□□ 13.9
PRPF8Q6P2Q9 PLEKHA7-216ENST00000533901 507 ntTSL 39.19□□□□□ -0.946e-12■■□□□ 13.9
PRPF8Q6P2Q9 SIDT2-208ENST00000525478 840 ntTSL 39.16□□□□□ -0.943e-9■■□□□ 13.9
PRPF8Q6P2Q9 ENAH-207ENST00000497899 807 ntTSL 1 (best)9.12□□□□□ -0.953e-9■■□□□ 13.9
PRPF8Q6P2Q9 KRTCAP2-208ENST00000491084 598 ntTSL 39.06□□□□□ -0.962e-6■■□□□ 13.9
PRPF8Q6P2Q9 ZNF641-203ENST00000544117 7819 ntTSL 1 (best) BASIC9.06□□□□□ -0.966e-12■■□□□ 13.9
PRPF8Q6P2Q9 CENPN-209ENST00000569461 329 ntTSL 39.04□□□□□ -0.962e-6■■□□□ 13.9
PRPF8Q6P2Q9 XPO6-218ENST00000570007 566 ntTSL 29.01□□□□□ -0.972e-6■■□□□ 13.9
PRPF8Q6P2Q9 PLEKHA7-213ENST00000531776 3591 ntTSL 28.98□□□□□ -0.976e-12■■□□□ 13.9
PRPF8Q6P2Q9 AP002495.1-207ENST00000534704 580 ntTSL 38.97□□□□□ -0.972e-6■■□□□ 13.9
PRPF8Q6P2Q9 ANKRD13C-202ENST00000370944 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.982e-6■■□□□ 13.9
Retrieved 100 of 73,762 protein–RNA pairs in 1477.2 ms